Detailed information on CNT30363124


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT002726, E-value = 5e-60

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696470Sorghum bicolorOryza sativa101.3232.990.87230reverse complement
CNT30516721Sorghum bicolorJuglans regia44.055.7486100reverse complement
CNT30730480Sorghum bicolorCorchorus capsularis101.3218.3790230reverse complement
CNT30156864Sorghum bicolorPistacia vera73.1311.2886.14166reverse complement
CNT30181978Sorghum bicolorSecale cereale101.3226.0291.3230reverse complement
CNT30221603Sorghum bicolorHordeum vulgare101.3219.0990.87230forward
CNT30389404Sorghum bicolorTriticum turgidum101.3215.8991.3230reverse complement
CNT30592527Sorghum bicolorMusa acuminata42.7329.0490.7297forward
CNT30234026Sorghum bicolorBrassica oleracea73.5742.0788.62167reverse complement
CNT30511493Sorghum bicolorSolanum lycopersicum62.1115.7789.36141reverse complement
CNT30258698Sorghum bicolorAvena sativa101.3228.4789.57230reverse complement
CNT30596312Sorghum bicolorOryza meridionalis3716.692.8684reverse complement
CNT30360996Sorghum bicolorLactuca sativa101.3215.7690.43230forward
CNT30484157Sorghum bicolorChara braunii25.113.510057reverse complement
CNT30434643Sorghum bicolorPapaver somniferum10030.5185.02227forward
CNT30118490Sorghum bicolorCitrus clementina22.0311.299650forward
CNT30550626Sorghum bicolorOryza brachyantha98.6876.4584.38224reverse complement

Expression of CNT30363124

Peptides detected in this lncRNA

>peptide 1 (35 aa)
RTRRWAWKQPSFEESVIAHSDPWHRKCLSSSDSPN*

Sequence

>CNT30363124
TAGAACCAGGAGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTCAGATCCATGGCACCGAAAATGTCTCAGCTCAAGTGATTCA
CCAAATTAAAGCGACGAGACCTTGAAAGCTGCTTTTTCAAGTGTCAGTAGTGGGACATCCTATCAATCAGGGAAGGTTTTTGGTGACAAGACCTGGAGAT
ATCAGAAGTGAGAATGCTGACATGAGT