Detailed information on CNT30363115


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517803Sorghum bicolorJuglans regia45.2714.1481.34134forward
CNT30190004Sorghum bicolorSecale cereale22.310.286.3666reverse complement
CNT30299505Sorghum bicolorTriticum aestivum88.1823.987.74261forward

Expression of CNT30363115

Peptides detected in this lncRNA

>peptide 1 (97 aa)
SLRNSVILVPLPSCSPDVSRVTVNDPPAWDSQTYCSSSLCLVVTTTLSATRSDLVMPMPLSMMESVFEALSGTMWMNSSGCASSLLLSVRLSNLILSN

>peptide 2 (97 aa)
LEEQCDLSTPAKLLPGCVTRNSERPTGLGFPDVLLVIVMLGGHDDSLGDEVGLGHADATVDDGERVRGLVWDNVDEQLRLRIELALVSEALEPDLVQR

Sequence

>CNT30363115
TCCTTGAGGAACAGTGTGATCTTAGTACCCCTGCCAAGCTGCTCCCCGGATGTGTCACGCGTAACAGTGAACGACCCACCGGCCTGGGATTCCCAGACGT
ACTGCTCGTCATCGTTATGCTTGGTGGTCACGACGACTCTCTCGGCGACGAGGTCGGACTTGGTCATGCCGATGCCACTGTCGATGATGGAGAGCGTGTT
CGAGGCCTTGTCTGGGACAATGTGGATGAACAGCTCCGGCTGCGCATCGAGCTTGCTCTTGTCAGTGAGGCTCTCGAACCTGATCTTGTCCAACGC