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Detailed information on CNT30362947


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30117119Sorghum bicolorOryza nivara7.9921.559050reverse complement

Expression of CNT30362947

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MCRKFRCDGESCKVLGFWVYVIGSQLRLILD*

>peptide 2 (38 aa)
NNHCLVLASKAVFACKIVRLMVTMRPCLDAKSFEILTL*

>peptide 3 (33 aa)
QQPLLSFGFKSCFRMQNSQADGDNEALFRCKKF*

Sequence

>CNT30362947
CAACAACCATTGCTTAGTTTTGGCTTCAAAAGCTGTTTTCGCATGCAAAATAGTCAGGCTGATGGTGACAATGAGGCCTTGTTTAGATGCAAAAAGTTTT
GAAATTCTGACACTGTAATATTTTCGTTTTTATTTGACAAACATTGTCTAATTATGGAGTAACTAGGCTTAAAAAATTCGTCTCGTGATTTACCGATAAA
CTGTGCAATTAGTTATTCTTTTTATCTATATTTCATACTTCATGCATGTGCCGTAAATTTCGATGTGACGGAGAATCTTGTAAAGTTTTGGGTTTTTGGG
TGTATGTAATCGGAAGCCAACTACGACTAATCCTAGATTGATGATCTACAGTGGAAACCAACATGTTTCGTGACTGCGTCAAAGACTAACGTCAGACGAC
TGGTCGGGTGGACCCTGTCAGCCCTACATGATCACAGCCCAAGCCCAACTGCACAAGTTAGGATTAATTGCTTATGGATACGGGTGCTGGTTAGTTATGA
CCGATTGACCCTTGCAAGAGATAACTTGGGCGCATGCATGCACGGGGGACCGTTGTCGTGCTTCCCCGGCGAGGCAGCGAGTACATACAAACAATGAGAA
CGCGTTGTTGACCTCCATCCAGGCTC