Detailed information on CNT30362772


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30703590Sorghum bicolorQuercus lobata29.135.6788.0667forward
CNT3069429Sorghum bicolorQuercus suber41.337.488.4295forward
CNT30177652Sorghum bicolorSecale cereale48.79.288.39112reverse complement
CNT30304781Sorghum bicolorTriticum aestivum31.744.9686.373reverse complement
CNT30669215Sorghum bicolorTriticum dicoccoides31.743.0386.373reverse complement

Expression of CNT30362772

Peptides detected in this lncRNA

>peptide 1 (75 aa)
EVLVEGAGELVLVEGAGELVERRWHLEALLEDAALALDAHDLGPLDEPVQVLLGRQRAADAELLRPLLEQRVHHFI

>peptide 2 (75 aa)
RFLSRVRVNWFLSRVRVNWLSAGGTLRRCLRMRRWRWMRTTLGHLTNRCRSFLGGNAPPMPNCFGLFSNRGFTTLS

Sequence

>CNT30362772
CGAGGTTCTTGTCGAGGGTGCGGGTGAACTGGTTCTTGTCGAGGGTGCGGGTGAACTGGTTGAGCGCCGGTGGCACCTTGAGGCGCTGCTTGAGGATGCG
GCGCTGGCGCTGGATGCGCACGACCTTGGGCCACTTGACGAACCGGTGCAGGTCCTTCTTGGGCGGCAACGCGCCGCCGATGCCGAACTGCTTCGGCCTC
TTCTCGAACAGAGGGTTCACCACTTTATCC