Detailed information on CNT30362276


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671404Sorghum bicolorSetaria viridis57.6926.4987.5120forward
CNT30636129Sorghum bicolorCapsicum annuum31.2513.687.6965forward
CNT30540598Sorghum bicolorBrassica napus48.5611.2282.18101forward
CNT30145579Sorghum bicolorMedicago truncatula29.8123.5788.7162forward
CNT30346665Sorghum bicolorEragrostis tef77.445.8788.2161forward
CNT30577134Sorghum bicolorOryza barthii83.6554.7290.23174forward

Expression of CNT30362276

Peptides detected in this lncRNA

>peptide 1 (44 aa)
LFTSGVINFPKFQATAIPIPKRAMIAEEDFNRPKSPTKHLVKTI*

Sequence

>CNT30362276
TTATTTACCTCTGGAGTGATAAATTTCCCCAAATTTCAGGCCACCGCCATACCCATACCAAAGAGGGCAATGATTGCTGAAGAAGATTTCAATAGACCCA
AGAGCCCAACGAAGCACCTGGTGAAGACGATCTGAAAGATTCAGAGGTGCAGAACCTTTGAATGCAACCCGTTTAGGTATGCAGTAAATTGACCGCCAAC
CATGACAA