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Detailed information on CNT3036197


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-93

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-56

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3051129Cucumis meloCucumis sativus67.9747.0197.6416forward

Expression of CNT3036197

Peptides detected in this lncRNA

>peptide 1 (99 aa)
TMQFTITMFISFREISNIHINKNINISGNQLYSTAIIGLQAAVSKYQIFNTLTFRNHSKTITNTQQRLDENLHTTTKTQHKVEGGLLLDVVIGKGTAVL*

>peptide 2 (61 aa)
MSLCWSGGIPSLSWIFALTLSMVSEDSTSRVMVLPVRVLTKICIPPRRRRTKWRVDSFWML*

Sequence

>CNT3036197
TACAATGCAATTCACCATTACGATGTTCATTTCATTTAGAGAAATAAGCAACATTCACATAAACAAAAACATAAACATTTCGGGAAATCAACTTTATTCA
ACAGCAATAATAGGCCTACAGGCAGCTGTTTCCAAGTACCAAATCTTCAACACATTAACATTCAGAAATCATTCAAAGACAATCACCAACACCCAACAAC
GTCTTGACGAAAATCTGCATACCACCACGAAGACGCAACACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGCAAGGGTACGGCCGTCCTCTA
ATTGCTTACCAGCAAAGATGAGTCTTTGTTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTTGCCTTGACGTTATCGATGGTATCAGAGGATTCGAC
CTCGAGGGTGATGGTTTTACCCGTCAGGGTCTTAACGAAAATTTGCATACCACCACGAAGACGGAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTG
TAGTCGGCCAAGGTACGGCCATCCTCGAGTTGTTTACCGGCGAAGATGAGACGTTGCTGATCCGGGGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGA
CGTTGTCGATCG