Detailed information on CNT30361774


BLAST search results

BLAST vs Swiss-Prot:
sp|P27788|FER3_MAIZE, E-value = 2e-62

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30684332Sorghum bicolorTriticum urartu9.1720.6992.8642forward
CNT30369772Sorghum bicolorOryza glumipatula26.4219.9790.91121forward

Expression of CNT30361774

Peptides detected in this lncRNA

>peptide 1 (84 aa)
MSAHSPPPAARHQGRIHPTGQLHQTRFCQHSGIKYVGVIWSIKLVLLTFRRDKLHLVDSHRRDIEFLGGLQAWNLHNMAEEAKR*

Sequence

>CNT30361774
AGAGCAATTGGTCCCTTGCCAAATTGAAAAGCCCTAGCCCTAGTACAGGTCACCTTCCTTGTGGGTGTGGATGACGCAGTCGGACTTTGGGTAGGAGACG
CATGTCAGCACATAGCCCTCCTCCTGCTGCCCGTCATCAAGGAAGGATCCATCCGACTGGTCAACTGCACCAGACTCGATTTTGCCAGCACAGCGGCATC
AAGTATGTAGGTGTCATCTGGAGCATCAAACTCGTGCTCTTGACCTTCAGGCGTGACAAGCTTCACCTTGTAGACAGCCATCGCAGAGACATCGAGTTTC
TTGGAGGTCTTCAGGCTTGGAACCTTCATAACATGGCTGAAGAAGCTAAGAGATGAAGGGCTCTTCACCGCTGTCTGGGAGGCCTGTGTTCTAACATTGC
CCAACAGCGTGCAGGAAGTAGCAAATGTGCTGGTCGACATCTTGAAACCTGACTACCT