Detailed information on CNT30361694


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692141Sorghum bicolorOryza sativa36.211.9298.7580forward
CNT30703372Sorghum bicolorQuercus lobata21.2710.9391.4947forward
CNT30616476Sorghum bicolorSesamum indicum21.279.4897.8747forward
CNT30589607Sorghum bicolorMusa acuminata44.342592.8698forward
CNT30553135Sorghum bicolorOryza glaberrima78.7324.7295.98174forward
CNT30132327Sorghum bicolorLolium perenne61.0924.7389.63135forward
CNT301476Sorghum bicolorZea mays26.717.9994.9259forward
CNT30231564Sorghum bicolorAnanas comosus52.948.9790.6117forward
CNT30345256Sorghum bicolorEragrostis tef58.8225.2994.62130forward
CNT30596021Sorghum bicolorOryza meridionalis83.7138.5496.22185forward
CNT30148558Sorghum bicolorBrachypodium distachyon24.4322.2210054forward
CNT30101081Sorghum bicolorOryza rufipogon61.0911.0893.33135forward
CNT30116289Sorghum bicolorOryza nivara61.0917.2693.33135forward
CNT30113588Sorghum bicolorFicus carica38.4613.4790.5985forward

Expression of CNT30361694

Peptides detected in this lncRNA

>peptide 1 (72 aa)
DALEVEGVEDLEGEDDLVELDLAVVAEVEAVDGLVPVAVPVRDVLDQHADPRRDPQPLVQAAAVHLRVRGGDG

>peptide 2 (40 aa)
MASYRSPFRSGTCWISTQIPAVIPSRLSRLPLYTCVCVAEM

Sequence

>CNT30361694
GGGATGCCCTTGAGGTAGAAGGTGTAGAAGATCTTGAAGGGGAAGACGATCTGGTTGAGCTTGACCTGGCCGTAGTCGCCGAAGTAGAAGCTGTAGATGG
CCTCGTACCGGTCGCCGTTCCGGTCCGGGACGTGCTGGATCAGCACGCAGATCCCCGCCGTGATCCCCAGCCGCTTGTCCAGGCTGCCGCTGTACACCTG
CGTGTGCGTGGCGGAGATGGT