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Detailed information on CNT30361592


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522318Sorghum bicolorSetaria italica12.7443.7296.8194forward
CNT30595868Sorghum bicolorOryza meridionalis17.7554.5890.84131forward

Expression of CNT30361592

Peptides detected in this lncRNA

>peptide 1 (88 aa)
MQDWTPSSWRMARRCGTRCFQTDWSVPKPCASTMTPRLPSPTTRRLCASSTIPMPVRAPLVRRRRRGRGRGEEERAAEAEGSGKRMNGG

>peptide 2 (60 aa)
YIDKEWILPEKMPTRYSSRRLRVNHKPDMLTAIYSIEFLLEVPNRALISQTQKLPSWGRG*

Sequence

>CNT30361592
AGTATATCGACAAAGAGTGGATCCTTCCAGAAAAGATGCCCACACGCTACTCTAGTCGTAGACTCAGAGTGAACCACAAGCCAGACATGTTGACAGCCAT
ATATAGTATAGAATTTCTGTTGGAGGTCCCTAACAGGGCTCTAATTTCCCAAACCCAGAAGTTGCCGTCATGGGGACGGGGCTAGGGGCTCCGTGCTGCT
GGTTACCTTGTACTAGTTTCTAGAGAGCTTGTATTAGCAAAATTAAAGCACAACAGGGAAATCAAGAGCTGCCGCAGTCGATTCGTTCCCCTCCCTGTTC
CCAATCATGAAGGTATGGAACAGAGCGATCATGAAGGAAGCAGCAAAGCGGGGGAATTGAGTTGAGTTACCTTGGGGACGCGGAGAGTAGGACGAGCTTT
GTGAAGAGGTCGGGCCTTGAGATGGAGGCGAGCGCGCCGATGACGGCGGAGACGGAGTGGCCGACGTAGATGCAGGACTGGACGCCGAGCTCCTGGAGGA
TGGCGAGGAGGTGCGGGACCAGGTGCTTCCAGACGGACTGGTCGGTGCCGAAGCCGTGCGCCAGCACGATGACCCCGCGCTTGCCCTCGCCCACCACGCG
CAGGTTGTGCGCCTCCTCCACGATCCCCATGCCCGTCCGTGCTCCTTTGGTGCGGCGGCGGCGGCGGGGACGGGGTCGGGGAGAGGAGGAGAGAGCCGCG
GAGGCGGAGGGCAGTGGGAAACGGATGAATGGCGGGCG