Detailed information on CNT30361585


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372848Sorghum bicolorArabidopsis thaliana29.8718.6790.18112forward
CNT30383102Sorghum bicolorTriticum turgidum27.4735.1596.12103forward
CNT30562914Sorghum bicolorActinidia chinensis25.0730.9284.0494forward
CNT3079816Sorghum bicolorBrassica juncea27.4737.4590.29103forward
CNT30609153Sorghum bicolorGossypium raimondii20.2718.7785.5376forward
CNT30648424Sorghum bicolorRosa chinensis26.9331.4693.07101forward
CNT30720138Sorghum bicolorTriticum spelta27.7330.2396.15104forward
CNT30595858Sorghum bicolorOryza meridionalis31.4710.692.37118forward
CNT30369756Sorghum bicolorOryza glumipatula31.478.791.53118forward
CNT30104286Sorghum bicolorOryza rufipogon27.4715.496.12103forward

Expression of CNT30361585

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLPSASLTEEGVESIITSPNGLVTRHLAISLN

Sequence

>CNT30361585
CAAGAAGCAACAATATAGACAACCATATAACGGCTCTTAATAACCCAACAAGTCGCAAAGCAGGGAATTAACCACAAGTCTTACAACATCGGGTGTTGTA
AACCACACAATGACAGATAAGTTCGGAACCCACAGACAAACAAGATAGTACGAGCCACTCAGGGCAGATCACGGGATAATTGCAGCAAATAGGCCCGACG
CTGTAGAACCAGAAAGCTTCTAGTACTCGTCGCCCTCGTCACCATCCTCACCCTCGTCAACAAACACAGCACGGGGGACATGCTTCCCAGCGCCAGTCTC
ACTGAAGAAGGTGTTGAAAGCATCATCACCTCCCCCAACGGTCTTGTCACCAGGCATCTGGCCATCAGCCTGAAT