Detailed information on CNT30361429


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30299735Sorghum bicolorTriticum aestivum16.8521.8585.8792forward
CNT30446496Sorghum bicolorSaccharum spontaneum17.9533.1198.9898forward
CNT30339792Sorghum bicolorEragrostis tef17.442.692.6395forward
CNT30109709Sorghum bicolorOryza longistaminata22.3419.2484.43122forward

Expression of CNT30361429

Peptides detected in this lncRNA

>peptide 1 (37 aa)
SLFNTWMTHADRERGHTQGSMGLFILSQAVNERRLDH*

>peptide 2 (91 aa)
MGRREQAKRDGDVVEVGEAEEVSGEVLVLGEPRLVHLQHLLQLLQVLLHHFLVRSGTRRRPPPAPPRTGSRSTTPSHRTASSEPSTTTLLP*

Sequence

>CNT30361429
TAGCTTATTCAACACCTGGATGACACATGCCGATCGAGAACGAGGACACACACAGGGGTCGATGGGCTTATTTATATTAAGCCAAGCAGTGAACGAACGA
AGACTCGATCACTAATTTCAAGCAGACGGCTTCATGAGCGCGGCGACCTTCTGGACAGACGGCCTGGCCATGAGGCCATCCCACCATGCCTTGACGTGAG
GGTACGCGTTGAGCACAGAAGCATGGGGCGTCGCGAGCAGGCAAAGCGTGACGGAGACGTGGTTGAGGTCGGCGAGGCTGAGGAAGTCTCCGGCGAGGTA
CTTGTGCTTGGCGAGCCGCGCCTCGTACACCTCCAGCACCTTCTTCAGCTTCTCCAGGTTCTCCTCCACCACTTTCTGGTACGATCTGGTACTCGGCGCC
GGCCTCCTCCAGCGCCACCACGCACCGGGTCACGTTCCACGACACCGTCGCACCGTACAGCTTCATCGGAGCCATCAACGACGACCTTATTGCCCTAGCT
TCTCTCTATCTCTCTATATTCTCTGCTAGCTAGGCGAAGTGGCGCA