Detailed information on CNT30361407


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641074Sorghum bicolorNymphaea colorata46.9765.493.75240forward
CNT30629386Sorghum bicolorVigna unguiculata29.7558.9190.79152forward
CNT301973Sorghum bicolorZea mays17.2236.8210088forward
CNT30595966Sorghum bicolorOryza meridionalis47.1639.3194.19241forward

Expression of CNT30361407

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MYILKVRSSRIVGMCSLDWCTIGAKSLKSFASISWPPIRRAPPRRLALPRRTPRRWRPWTAPRAGCRTRWT*

>peptide 2 (29 aa)
MADAVRYRPCRGSAAHIMFLASHICCVSSG

Sequence

>CNT30361407
CGGTGACAGTATATCACAAGTTCACAAAACACTAACACACACGAGAGTGACACGACTGTAGATACACACACAAGCTAGCAGCAGTAACGGAAATACGGCA
GTACTGAATGTACATACTTAAGGTACGTAGTAGTAGGATTGTAGGAATGTGTAGTCTCGATTGGTGTACCATAGGAGCGAAGTCTCTGAAGTCCTTTGCA
TCGATCAGTTGGCCTCCGATCAGGCGTGCTCCTCCTCGCCGTCTTGCTCTTCCTCGTCGTACTCCTCGGCGGTGGAGGCCATGGACAGCCCCACGGGCGG
GATGTCGCACACGCTGGACTTGACGTTGTTGGGGATCCACTCCACGAAGTAGGAGGAGTTCTTGTTCTGCACGTTGATCATCTGCTCGTCCACCTCCTTG
GTGCTCATCTTGCCCCGGAACATGGCGGACGCCGTCAGGTACCGCCCGTGCCGCGGGTCCGCCGCGCACATCATGTTCTTGGCGTCCCACATCTGCTGCG
TCAGCTCCGGC