Detailed information on CNT30361099


BLAST search results

BLAST vs Swiss-Prot:
sp|P23666|GUN2_PERAE, E-value = 2e-26

BLAST vs NONCODE:
NONORUT003945, E-value = 2e-25

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552890Sorghum bicolorOryza glaberrima16.8539.7790140forward
CNT30721322Sorghum bicolorTriticum spelta16.1328.0390.3134forward
CNT30596016Sorghum bicolorOryza meridionalis28.5235.0190.3237forward
CNT30148063Sorghum bicolorBrachypodium distachyon19.7431.3687.8164forward
CNT30100962Sorghum bicolorOryza rufipogon16.8523.4190140forward
CNT30575816Sorghum bicolorOryza barthii28.7660.3583.68239forward
CNT30116017Sorghum bicolorOryza nivara16.8542.0490140forward

Expression of CNT30361099

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MKSHSYKIICKGAISTKRTSHMSWNANSNNTPKN*

>peptide 2 (49 aa)
MHLCDEGASGTCFQNPQRSSSLMGSFQGLGFAVLEHYGSCSQGGSHFRC*

>peptide 3 (45 aa)
MFDRGFYTDLSYGYRNTSSISLCCPLSCSWPLLYQMIICLLHFPI*

>peptide 4 (74 aa)
MLSAFLFLAFAVPNDHMFAPLPYLMLWKIFRGLSLYGFHADGDGVLINAEPSSFDIRYRNQCCNQTSICCKSRL*

>peptide 5 (40 aa)
MVSMLMAMVFLSMPNRPVLISDIEISAATKPAFAARVGSE*

>peptide 6 (38 aa)
MPVRASHHCSNKDIRVCLFCIPPFVTSFASILDAIMRY*

Sequence

>CNT30361099
TGATGAAAAGTCACTCCTATAAAATAATTTGTAAAGGTGCCATTTCTACAAAAAGAACTTCACACATGAGCTGGAATGCCAATAGCAACAACACCCCCAA
AAATTAGCTTCACGCGATGCACACAACTTCCGATCTATGTTTGACAGAGGATTTTATACTGATCTGTCATACGGGTACAGAAATACAAGCTCTATAAGCT
TATGCTGTCCGCTTTCCTGTTCCTGGCCTTTGCTGTACCAAATGATCATATGTTTGCTCCACTTCCCTATTTGATGCTTTGGAAAATATTCAGAGGTCTG
TCTCTTTATGGTTTCCATGCTGATGGCGATGGTGTTCTTATCAATGCCGAACCGTCCAGTTTTGATATCAGATATAGAAATCAGTGCTGCAACCAAACCA
GCATTTGCTGCAAGAGTAGGCTCTGAGTAATTGTAGTTTGTGCGGACATCTTTGTAGCCATCATGCCTGTCAGGGCCAGCCACCATTGCTCCAACAAGGA
TATTAGGGTTTGCCTTTTTTGTATCCCTCCATTTGTAACCTCCTTTGCATCCATACTTGACGCCATTATGAGGTATTGATGCACCTCTGTGATGAGGGCG
CTTCGGGTACTTGTTTCCAAAACCCACAACGTAGCTCATCTTTAATGGGTTCTTTCCAAGGATTAGGTTTTGCTGTCCTTGAACACTATGGAAGCTGCAG
CCAGGGCGGCAGCCATTTCAGATGCTAGATCTGAGCAAGAGTGACACTCAGTGACTGGCCTTTTGTAATCGATGTCCTCTGGTCTCATCCAGCAGTAATG
GTCATTAGGCTGACTGCCACCTTTAGAGGTG