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Detailed information on CNT30360899


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690835Lactuca sativaOryza sativa84.7552.2493.93478reverse complement
CNT30617621Lactuca sativaSesamum indicum34.7574.2493.88196reverse complement
CNT30502639Lactuca sativaNicotiana attenuata42.7323.8683.4241forward
CNT30396203Lactuca sativaTriticum turgidum48.5893.8490.51274reverse complement
CNT30509771Lactuca sativaSolanum lycopersicum22.5212.1294.49127forward
CNT30555485Lactuca sativaOryza glaberrima33.3315.0591.49188reverse complement
CNT30441793Lactuca sativaAegilops tauschii49.6561.2790280forward
CNT30314546Lactuca sativaCamelina sativa98.9462.2197.13558reverse complement
CNT3018193Lactuca sativaZea mays43.4488.4589.39245reverse complement
CNT30339731Lactuca sativaEragrostis tef17.0228.6693.7596forward
CNT30103751Lactuca sativaOryza rufipogon39.3698.6793.69222forward

Expression of CNT30360899

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MEKTKLFQAPTEPEAPLLSKRRGRIIHISFDGQRRIES*

Sequence

>CNT30360899
AAAAATGGGAAATGCCCTACCTTTGAGTGCGGTTTGAACTATTGATTTACGTAATTGGAAGTAACCAATTAGGTTTACGACGAAACCTAGAAATCGATCA
CTGATCCAATTTGAGTACCTCTACAGGATAGACCTCAACAGAAAACTGAAGAGTAACGGCAGCAAGTGATTGAGTTCAGTAGTTCCTCATATAAAATTAT
TGACTCTAGAGATATAGTAATATGGAGAAGACAAAATTGTTTCAAGCACCGACAGAACCGGAAGCGCCCCTTCTTTCAAAGAGAAGAGGACGGATTATTC
ACATTTCATTTGATGGTCAGAGGCGAATTGAAAGCTAAGCAGTGGTAATTCTAAAGATTCCCGGGGGGAAAAATAGAGATGTCTCCTACGTTACCCATAA
TATGTGGAAGTATCAACGTAATTTAATAGAGTCATCCGGTCTGAATGCTACATGAAGAACATAAGCCAGATGATGGAACGGGAAGACCTAGGATGTAGAA
GATCATAACATGAGTGATTCGGCAGATTTTGATTCCTATATATCCACCCATGTGGTACTTCATT