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Detailed information on CNT30360144


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7FNT3|PSBA_ATRBE, E-value = 2e-107

BLAST vs NONCODE:
NONCQUT000002, E-value = 2e-150

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30489969Lactuca sativaOlea europaea20.995.8190.35114forward
CNT30685372Lactuca sativaTriticum urartu102.5860.7489.77557forward

Expression of CNT30360144

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MSGYDIISFFFLTESVTFISRFIFCGFPDQTRGYQRTMHTIRKASLTNWVDQENSSRSCNRS*

>peptide 2 (42 aa)
MSITFMHNFHTKVSTVNDISPSINYTALTINYRLVESHSADT*

Sequence

>CNT30360144
CCATTTGTAGATGGAGCTTCGATAGCAGCTAAGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAGCACGGTTAATGA
TATCAGCCCAAGTATTAATTACACGGCCTTGACTATCAACTACCGATTGGTTGAAAGCCATAGTGCTGATACCTAAAGCAGTGAACCAGATACCTACTAC
AGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAGTTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTA
TAAGTTTCTTCTTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAGGTTACCAAAGAACCATGCATAC
CATCAGAAAAGCTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGTCGCATACC
CAGACGGAAACTAAGCTCCCACTCACGACCCATGTAACAAGCT