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Detailed information on CNT30359527


BLAST search results

BLAST vs Swiss-Prot:
sp|P12333|CB2A_SPIOL, E-value = 4e-122

BLAST vs NONCODE:
NONBNAT005173, E-value = 6e-68

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30725255Lactuca sativaLupinus angustifolius78.2949.484.62494forward

Expression of CNT30359527

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MGRSYHQGKVGQQPHPMVHRQFCSPQQHPSR*

>peptide 2 (35 aa)
MSLDQQKVRRCPSRSHLGIHRSGMMEPRRRMGLGT*

>peptide 3 (86 aa)
MDQTRVSQVIKPTFTEDLGSSLEPYSLTELHTITGQELREDAAKSSKHCPSAVDDLKLTVLGKCLWISRKSGGVPAVVTWEFTGQV*

Sequence

>CNT30359527
CCCAAAAATAGCTATATATTAATTCACAAATCATTTTACATCAAAACCCTTATTTAGTACATTCACTTTCCGGGGACAAAGTTTGTAGCATAAGACCAGG
CGTTATTTGCAACAGGGTCAGCAAGCCAGTCTCCCATTCTTGATCTCCTTCACCTTCAACTCAGCAAAAGCCTCTGGATCATCTGCAAGGCCCAATGGGT
CGAAGCTACCACCAGGGTAAAGTGGGTCAACAACCTCACCCAATGGTCCACCGGCAATTCTGTAGCCCTCAACAGCACCCATCAAGATGACTTGGGTGGC
CCAGATAGCCAAGATGCTCTGAGCATGGACCAAACTAGGGTTTCCCAAGTAATCAAGCCCACCTTCACTGAAGATCTGGGATCCAGCCTTGAACCATACA
GCCTCACCGAACTTCACACCATTACGGGCCAAGAGCTCAGGGAAGACGCAGCCAAGAGCTCCAAGCATTGCCCATCTGCAGTGGATGACCTCAAGCTCAC
GGTTCTTGGAAAATGTCTCTGGATCAGCAGAAAGTCCGGCGGTGTCCCAGCCGTAGTCACCTGGGAATTCACCGGTCAGGTATGATGGAGCCTCGCCGGA
GAATGGGCCTAGGTACTTGACACGGTCAGGG