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Detailed information on CNT30359520


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 4e-14

BLAST vs NONCODE:
NONVVIT003033, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671914Lactuca sativaSetaria viridis31.4648.1795.26801reverse complement
CNT30550219Lactuca sativaIpomoea triloba54.1231.7498.191378reverse complement
CNT30619000Lactuca sativaSesamum indicum54.5245.4396.971388reverse complement
CNT3020470Lactuca sativaCitrullus lanatus13.2862.7198.82338forward
CNT30730372Lactuca sativaCorchorus capsularis55.5473.0796.751414reverse complement
CNT30632407Lactuca sativaVigna unguiculata53.4650.3997.061361forward
CNT30490123Lactuca sativaOlea europaea33.0348.3199.05841reverse complement
CNT30505430Lactuca sativaNicotiana attenuata54.1658.7698.621379reverse complement
CNT30712870Lactuca sativaGlycine max29.2644.8397.72745reverse complement
CNT3092080Lactuca sativaSolanum tuberosum13.257.6396.73336reverse complement
CNT30569655Lactuca sativaActinidia chinensis56.1340.1396.081429reverse complement
CNT30605068Lactuca sativaGossypium raimondii52.5187.596.931337forward
CNT30216578Lactuca sativaKalanchoe fedtschenkoi52.3239.9997.221332reverse complement
CNT30655407Lactuca sativaRosa chinensis54.0841.1997.751377reverse complement
CNT30628241Lactuca sativaDaucus carota52.6349.6398.881340forward
CNT30571858Lactuca sativaVitis vinifera5238.298.411324forward

Expression of CNT30359520

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MFFTGFIVTHVSILTSDISRSCHQKPSPIDRTFRY*

>peptide 2 (36 aa)
MFARWAECSPTSESSPLDNKKCPPLRSPNYDESFAF*

>peptide 3 (38 aa)
ADFRLCSTSRSHSQAGLYHYAHEQNLSLSLPSHTSVTL*

>peptide 4 (68 aa)
MCRFPNQKIGEHPFSRSYEVILPSSFDMVLSSALVYSTFSPVSIWGTVNSPGGSPSQFEVFSWKFQPC*

>peptide 5 (34 aa)
MTTVATINRLATMAGRYALLSRDPYSNQKTKGPY*

>peptide 6 (31 aa)
MGTNLQGYHLLWPDLPTFSQLQFTAPLTKLI*

Sequence

>CNT30359520
TGGCCGACTTTCGTCTCTGTTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCACGAGCAGAATCTTAGCTTGAGCCTACCTTCGCA
CACCTCCGTTACTCTTTAGGAGGCATCCGCCCCAGATAAACTACCCACCTCGCAGTGTCCCGCCCCCCCCCGAATGATCGGTGCGGCGGTTAGGCATCCT
TAGACGAAAGAGTGGTCTTTCAGGATTGGTCGTTGTGTGTCACCACCTCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTAAA
GGTGCACGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTTACA
CCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCTTAT
AACACTTCTCCTTCCGACTTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTA
CCCCCTGGTATGTGCCGCTTTCCTAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGAGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTCT
CAAGCGCCCTAGTATACTCTACTTTTTCACCTGTGTCGATTTGGGGTACGGTCAATTCACCGGGAGGATCGCCCTCCCAATTCGAAGTTTTTTCCTGGAA
GTTTCAACCTTGTTGACTATGACAACAGTCGCGACTATAAACAGACTCGCGACTATGGCAGGGCGGTACGCTCTGCTCTCTCGCGACCCCTACTCTAATC
AAAAGACTAAAGGCCCCTACTGAAGATTCAAAGGGCGAGCACTTAAATGAGAAAGGCTTGTAGACTCGTGACGCTGAACGAGACATTCGAAAACTAAAGC
GCACACTAGAAAGTGCTTCGAAAGGTGTCAGCAGGTGCGCGGAGCCGGAGCCCGGCATGTTCGCCCGCTGGGCCGAGTGTTCGCCCACTTCAGAGTCTTC
GCCTTTAGATAACAAAAAGTGTCCGCCCCTTAGGTCGCCAAACTACGACGAGAGTTTCGCCTTTTGAAGCGCCAGTCGCGTAGGGCGACCGGGCCAGGCC
GAGTCAGAAAGGCTTTGATGACTCAAGGTTCATATTAGGGAAAGGAGAGTGAGGGGAAGAGGGGGCAGCCCTCGGCCCGATCATCCAATTCGCTCCAACA
GACAGGCATGGTTCTGTAGTCAAAGCAACTTCGTCACTTTCGTGTACCCATCGGACGGCAGCCCTTTCGGGGGTTCCTTAGGGACCGATTCACTCTGTGT
AGATTGACTGAACGCAGAAAACCTTCCACTGGCAGGCGATCATGTTTTTCACAGGATTTATCGTTACTCATGTCAGCATTCTCACTTCTGATATCTCCAG
GTCTTGTCACCAAAAACCTTCCCCGATTGACAGAACGTTCCGCTACTGACACTTGAAAAAGCTGCTTTCAAGGTCTCGTCGCTTCGGTGAATCACTTGAG
CCCTGATACATTTTCGGTGCCATGGAGCTAGACCAGTGAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCGCTC
GATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCTGTTTCCCTCTCGACTTTGGATCTTAGCACCCAAAAAGTCTGTC
TGTACAAACGATCTAGGCCTGTATTCGGAGTTTCCTTGGGGTTGGTAAGGCGAAATGGGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGAC
ATCATACGCTCTACTGAAATAGATTTCGCGGAAAACCAGCTATATCCGATCTTGGTTGGCCTTTCACCCCTAGCCACAAGTCATCCCCGTATTTTGCCAC
ATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTCTCTTCATCCTGCTCATGGCTAGATCGATCGGTTTCGGGTCAAATAGGAAGAACTAGAAGATTC
CACCTCTGGAAAGCGCCTACACCTAATGGCTTAAGCCGCTGTTCCCATTTCCTCGCTGACCCATCATGCAAAAGGTACGCCGTTAGAGTGAGTGCGCTTG
ACTAATATAGAAAGTCAAGGCTCTAAGCTCCGCTCCTTCGACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCTAAATAGGGTTCTTTTC
ACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGGGTGGTCCCCCTTTCTCGCGTAAAAGCGATCAGAATTCGAAC
ACGCCGCGTTTTACTGGGAAGGATCGAACCATGGGAACGAATCTACAGGGCTATCACCTTCTTTGGCCAGATCTTCCAACCTTTTCACAATTACAGTTCA
CAGCGCCCTTGACTAAACTAATCTAATAGAAAGTCAAGGGGCTTGA