Detailed information on CNT30359134


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 4e-14

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30207637Lactuca sativaHelianthus annuus73.6100.297.61960forward

Expression of CNT30359134

Peptides detected in this lncRNA

>peptide 1 (42 aa)
DARALRRKDAFRGERPWGDTVCDPWISDRETVSKLRGYFQAP*

>peptide 2 (30 aa)
MMSMARGRALNGLGWPHFALPTPRKLRIQA*

>peptide 3 (84 aa)
MPGSGSAHLLTPFEALSSVRFSFRMSRSASRVYKPFSFKCSPFESSVGAFSLLIRVGVAREQSVPPCHSRESVYSRDCCHSQQG*

>peptide 4 (50 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESSFFKCQ*

>peptide 5 (45 aa)
MSNDKSCEKHDRLPVEGFLRSVNLHRVNRSLRNPRKGCRPMGTRK*

Sequence

>CNT30359134
GGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGATACCGTCTGTGATCCATGGATCTCCGATCGGGAAACCGTATCC
AAGCTCCGTGGCTACTTTCAAGCCCCTTGACTTTCTATTAGATTAGTTTAGTCAAGGGCGCTGTGAACTGTAATTGTGAAAAGGTTGGAAGATCTGGCCA
AAGAAGGTGATAGCCCTGTAGATTCGTTCCCATGGTTCGATCCTTCCCAGTAAAACGCGGCGTGTTCGAATTCTGATCGCTTTTACGCGAGAAAGGGGGA
CCACCCTCTAAGCCTAAGTATTCCTCAATGACCGATAGCGTACAAGTACCGTGAGGGAAAGGTGAAAAGAACCCTATTTAGGGAGTGCAATAGAGAACCT
GAGATCCGATGCGAACAATCAGTCGAAGGAGCGGAGCTTAGAGCCTTGACTTTCTATATTAGTCAAGCGCACTCACTCTAACGGCGTACCTTTTGCATGA
TGGGTCAGCGAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAATCTTCTAGTTCTTCCTATTTGACCCGAAACCGAT
CGATCTAGCCATGAGCAGGATGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGA
AAGGCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGG
TGGCCCCATTTCGCCTTACCAACCCCAAGGAAACTCCGAATACAGGCCTAGATCGTTTGTACAGACAGACTTTTTGGGTGCTAAGATCCAAAGTCGAGAG
GGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGGAAGTGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGCAGCC
ATCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAGCTCCATGGCACCGAAAATGTATCAGGGCTCAAGTGATTCACCGAAGCGACGAGACCTTGAAAGC
AGCTTTTTCAAGTGTCAGTAGCGGAACGTTCTGTCAATCGGGGAAGGTTTTTGGTGACAAGACCTGGAGATATCAGAAGTGAGAATGCTGACATGAGTAA
CGATAAATCCTGTGAAAAACATGATCGCCTGCCAGTGGAAGGTTTTCTGCGTTCAGTCAATCTACACAGAGTGAATCGGTCCCTAAGGAACCCCCGAAAG
GGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACAGAACCATGCCTGTCTGTTGGAGCGAATTGGATGATCGGGCCGAGGGCTGCC
CCCTCTTCCCCTCACTCTCCTTTCCCTAATATGAACCTTGAGTCATCAAAGCCTTTCTGACTCGGCCTGGCCCGGTCGCCCTACGCGACTGGCGCTTCAA
AAGGCGAAACTCTCGTCGTAGTTTGGCGACCTAAGGGGCGGACACTTTTTGTTATCTAAAGGCGAAGACTCTGAAGTGGGCGAACACTCGGCCCAGCGGG
CGAACATGCCGGGCTCCGGCTCCGCGCACCTGCTGACACCTTTCGAAGCACTTTCTAGTGTGCGCTTTAGTTTTCGAATGTCTCGTTCAGCGTCACGAGT
CTACAAGCCTTTCTCATTTAAGTGCTCGCCCTTTGAATCTTCAGTAGGGGCCTTTAGTCTTTTGATTAGAGTAGGGGTCGCGAGAGAGCAGAGCGTACCG
CCCTGCCATAGTCGCGAGTCTGTTTATAGTCGCGACTGTTGTCATAGTCAACAAGGTTGAAACTTCCAGGAAAAAACTTCGAATTGGGAGGGCGATCCTC
CCGGTGAATTGACCGTACCCCAAATCGACACAGGTGAAAAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAGGAACTCGGCAAAATGACCTC
GTAACTTCGGGAGAAGGGGTGCTCTCCTATCTTTTGATTAGGAAAGCGGCACATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAG
TGGTAACACGATGTATAGAGTCTGACACCTGCCCGGTGCTGGAAAGTCGGAAGGAGAAGTGTTATAAGCTTTGAATGGAAGCCCCGGTAAACGGCGGCAG
TAACTCTAACTGTCCTAAGGTAGCGAAATTCCTTGTCGCATAAGTAGCGACCTGCACGAATGGTGTAACGACTGCCCCGCTGTCTCCGACATGGACCCGG
TGAAATTGAATTCTCCGTGAAGATGCGGAGTACCAACGGCTAGACGGTAAGACCCCGTGCACCTTTACTATAGCTTCGCAGTGACAACCTTGATCGAATG
TGTAGGATAGGTGGGAGGTGGTGACACACAACGACCAATCCTGAAAGACCACTCTTTCGTCTAAGGATGCCTAACCGCCGCACCGATCATTCGGGGGGGG
GCGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGGTGTGCGAAGGTAGGCTCAAGCTAAGATTCTGCTCGTGAG
CGTAATGGTATAAGCCTGCCTGACTGTGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCA