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Detailed information on CNT30359088


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515901Lactuca sativaJuglans regia34.9636.779.24236forward

Expression of CNT30359088

Peptides detected in this lncRNA

>peptide 1 (34 aa)
LQLVHRVQVHCRLFLALTTRQKHNSWHGCRHRPT*

>peptide 2 (34 aa)
MYDVRTLGLSEPGVTMLGFKRVPSRSTCCSLRAL*

>peptide 3 (36 aa)
PTCSSRSSSLSPVPRFDHPTETQFLARLPAPSYVGL*

>peptide 4 (32 aa)
MLDRRFPMVPVLSSAANIPFPGVAMYLAFLINS

Sequence

>CNT30359088
CTCCAACTTGTTCATCGCGTTCAAGTTCACTGTCGCCTGTTCCTCGCTTTGACCACCCGACAGAAACACAATTCCTGGCACGGCTGCCGGCACCGTCCTA
CGTAGGGCTGTGACGGTGTATTCAGCAATCACCTCCGGTGTCACCTGTTATATCAATGAAAGATATAAAATATATGCCTTTTCATAGATTTTCAGCTCTG
TTGATTTATGTATGATGTACGTACCTTAGGGCTATCAGAGCCGGGTGTAACCATGTTAGGTTTCAAGAGGGTTCCTTCAAGAAGCACGTGTTGCTCATTG
AGAGCCTTGTAAACCGCAGCTAGCACCATCTCGGTTGCATACGCGCATTTCTTGATATCATGGCTTCCGTCGGTCAACCACACCCTTATCGACTTTAATC
CCCGGAAGGACATTGGCCTCAAGGAGAACGTCAACAAAAGGCTTCCCGTCGGCGGTTTTCTGGTAAAGGGTTTCCTCGAAGAGAATGACACCGGAGAGGT
AAGTCACTGCGTTTGGAGCAGTGAAGAGAAGTTCACGGAGGGCTTGACGGTTTGACTCGACATTCTCAACGTTGATGCTCGACAGACGTTTCCCGATGGT
TCCGGTGCTCTCATCTGCAGCCAATATACCCTTCCCCGGTGTGGCGATGTACTTGGCATTCTTGATCAACTCATC