Detailed information on CNT30359036


BLAST search results

BLAST vs Swiss-Prot:
sp|P27492|CB21_TOBAC, E-value = 5e-171

BLAST vs NONCODE:
NONSTUT001352, E-value = 9e-50

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30173253Lactuca sativaTrifolium pratense46.6258.482.29497forward
CNT30146402Lactuca sativaMedicago truncatula55.1658.2882.14588forward
CNT30409978Lactuca sativaPapaver somniferum54.8861.3282.91585forward

Expression of CNT30359036

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MGYNPSPSGNLIHYQAFCVHPLLLLGYASTQKKHITVVTINN*

>peptide 2 (45 aa)
METRPFPKSSELEGLVFTAWPAKGEERAMVEAAIVSFLKLETKNI*

>peptide 3 (50 aa)
MDFLMAQPSWQLQSSSWKPVHFRKAQNLRDLFSLLGLRKERREPWWKQPL*

>peptide 4 (86 aa)
MDQTRVSQVIKPTFTEDLGSSLEPYSLTELHTITGQELREDAAKSSKHCPSAVDDLKLTVLGKCLWISRKSGGVPAVVTWEFTGQV*

>peptide 5 (35 aa)
MENIASLPFLISFTFNSAKASGSSARPNGSKLPPG*

>peptide 6 (35 aa)
MSLDQQKVRRCPSRSHLGIHRSGMMEPRRRMGLGT*

Sequence

>CNT30359036
CAGGATTTCCTTATCGATAATTGAATTTTTTTAATGGGTTACAACCCGAGTCCAAGCGGAAACTTGATCCATTACCAGGCCTTTTGTGTGCATCCACTTC
TACTATTGGGGTATGCGTCTACACAAAAAAAACACATCACAGTTGTAACAATTAACAACTAATTGCTATTTTACCATGTGCACAAGATACCCAAAAATAG
CTATATATTAATTCACAAATCATTTTACATCAAAACCCTTATTTAGTACATTCACTTTCCGGGGACAAAGTTTGTAGCATAAGACCAGGCGTTATTTGCA
ACAGGGTCAGCAAGGTGGTCAGCCAAGTTCTCCAACGGCCCCTTTCCTGTGACAATGGCTTGAACAAAGAACCCAAACATGGAGAACATAGCCAGTCTCC
CATTCTTGATCTCCTTCACCTTCAACTCAGCAAAAGCCTCTGGATCATCTGCAAGGCCCAATGGGTCGAAGCTACCACCAGGGTAAAGTGGGTCAACAAC
CTCACCCAATGCACCCATCAAGATGACTTGGGTGGCCCAGATAGCCAAGATGCTCTGAGCATGGACCAAACTAGGGTTTCCCAAGTAATCAAGCCCACCT
TCACTGAAGATCTGGGATCCAGCCTTGAACCATACAGCCTCACCGAACTTCACACCATTACGGGCCAAGAGCTCAGGGAAGACGCAGCCAAGAGCTCCAA
GCATTGCCCATCTGCAGTGGATGACCTCAAGCTCACGGTTCTTGGAAAATGTCTCTGGATCAGCAGAAAGTCCGGCGGTGTCCCAGCCGTAGTCACCTGG
GAATTCACCGGTCAGGTATGATGGAGCCTCGCCGGAGAATGGGCCTAGGTACTTGACACGGTCAGGGCCGTACCATGGACTTCCTGATGGCGCAGCCTTC
TTGGCAGCTGCAGTCTTCCTCATGGAAACCCGTCCATTTCCGAAAAGCTCAGAACTTGAGGGACTTGTTTTCACTGCTTGGCCTGCGAAAGGAGAGGAGA
GAGCCATGGTGGAAGCAGCCATTGTAAGTTTTCTTAAATTAGAAACTAAAAATATTTAGAAAGTTG