Detailed information on CNT30358858


BLAST search results

BLAST vs Swiss-Prot:
sp|Q5MYA4|H32_CICIN, E-value = 2e-49

BLAST vs NONCODE:
NONBRAT001321, E-value = 2e-43

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697930Lactuca sativaOryza sativa22.6630.0580.92131forward
CNT30376827Lactuca sativaArabidopsis thaliana18.6945.7681.48108forward
CNT30495125Lactuca sativaOlea europaea10.921.1490.4863forward
CNT30538358Lactuca sativaBrassica napus10.3820.9886.6760reverse complement
CNT30443283Lactuca sativaAegilops tauschii23.722.3182.48137forward
CNT30259840Lactuca sativaBrassica rapa36.5173.0185.31211forward
CNT30720171Lactuca sativaTriticum spelta20.0718.0184.48116forward
CNT30368649Lactuca sativaSorghum bicolor14.8820.4884.8886forward
CNT30114434Lactuca sativaEutrema salsugineum25.7837.4481.21149forward

Expression of CNT30358858

Sequence

>CNT30358858
CTAACATTAGAAATAAAATCTAAGCCCTCTCACCACGAATCCTACGAGCGAGCTGCATATCCTTAGGCATGATGGTGACTCTTTTAGCATGAATCGCACA
CAGATTTGTGTCTTCAAAGAGCCCAACAAGGTAAGCTTCGGAAGCCTCCTGTAGAGCAGCCACGGCGGAGCTTTGGAAACGCAGATCGGTCTTGAAATCT
TGAGCGATTTCCCTCACGAGTCTCTGGAATGGAAGCTTCCTGATCAAAAGCTCGGTGCTCTTTTGCGATTTCCCTCACGAGTCTCTGGAACGGAAGCTTC
CTGATCAAAAGCTCAGTGCTCTTCTGATACTTCCTGATCTCTCTCAATGCGACTGTTCCAGGCCTGAATCTGTGTGGCTTCTTCACTCCGCCGGTGGCCG
GAGCTGACTTCCTTGCCGCCTTGGTGGCCAACTGCTTCCTTGGAGCCTTTCCTCCGGTGGATTTCCTTGCAGTCTGCTTGGTACGAGCCATTTGAACGTA
AAAAAAGATTGGTGAATGGTGAAAGGTGAAAATTAACGAAGCTCTGAAACGATTGTTGTGTAAGATGTGGATCTAGGA