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Detailed information on CNT30358587


BLAST search results

BLAST vs Swiss-Prot:
sp|Q71T45|H32_EUPES, E-value = 2e-76

BLAST vs NONCODE:
NONATHT004002, E-value = 4e-41

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315797Lactuca sativaCorylus avellana32.7927.2386.11180forward
CNT30200890Lactuca sativaPisum sativum60.4753.9884.64332forward
CNT30304662Lactuca sativaTriticum aestivum18.762085.44103forward
CNT30219843Lactuca sativaHordeum vulgare24.7723.6980.15136forward
CNT30591253Lactuca sativaMusa acuminata18.432.3782.18101forward
CNT30141549Lactuca sativaLolium perenne18.7620.282.52103forward
CNT306284Lactuca sativaZea mays8.9322.991.8449forward
CNT30609694Lactuca sativaGossypium raimondii61.7544.2684.96339forward
CNT30723061Lactuca sativaTriticum spelta22.7721.1982.4125forward
CNT3053477Lactuca sativaAmborella trichopoda59.9352.5680.55329forward
CNT30148402Lactuca sativaBrachypodium distachyon18.420.5784.16101forward

Expression of CNT30358587

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MNGTQIGILKQTNQISLRSLLKCSDSTALEPQICLEILSDFSHKPLKWKLTDQELCALLVLTDLP*

Sequence

>CNT30358587
GTGATTTAATTAGAACCAATACAAACAGGTCAAAACAACATGACCTCGACAACAGATGATACTTTCTACAACACAAGTTAAACCCTAACCAATTTCATCA
AATCTAAGCCCTCTCGCCTCTAATCCTCCTGGCCAATTGCATATCCTTAGCATGAATGGCACACAGATTGGTATCCTCAAACAAACCAACCAAATAAGCC
TCAGAAGCCTCCTGAAGTGCAGCGACAGCACTGCTCTGGAACCTCAGATCTGTCTTGAAATCTTGAGCGATTTCTCTCACAAGCCTCTGAAATGGAAGCT
TACGGATCAGGAGCTCTGTGCTCTTCTGGTACTTACGGATCTCCCTTAGAGCAACGGTTCCTGGCCTGAATCTGTGTGGCTTCTTCACTCCTCCGGTGGC
CGGTGCTGATTTCCTGGCGGCTTTTGTCGCCAATTGCTTCCTCGGAGCTTTTCCACCGGTCGATTTGCGAGCAGTTTGCTTGGTTCTTGCCATTTTTTGC
GAATACAGAGAGGGATTAAGAAGATTTTGTTGCTGCAATGAAAAGCGAC