Detailed information on CNT30358481


BLAST search results

BLAST vs Swiss-Prot:
sp|Q71T45|H32_EUPES, E-value = 8e-89

BLAST vs NONCODE:
NONATHT004002, E-value = 2e-47

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521250Lactuca sativaSetaria italica18.5645.5880.59170forward
CNT30547549Lactuca sativaIpomoea triloba44.9853.2382.77412forward
CNT30700039Lactuca sativaQuercus lobata36.3568.183.78333forward
CNT30267640Lactuca sativaChenopodium quinoa44.7656.4783.9410forward
CNT3069241Lactuca sativaQuercus suber40.1783.6483.7368forward
CNT30709007Lactuca sativaGlycine max18.8972.6986.71173forward
CNT3048083Lactuca sativaPrunus dulcis45.258.9782.13414forward
CNT30283601Lactuca sativaTriticum aestivum19.8728.2281.32182forward
CNT30219859Lactuca sativaHordeum vulgare6.5524.186.6760forward
CNT30565750Lactuca sativaActinidia chinensis39.5232.9484.53362forward
CNT30508643Lactuca sativaSolanum lycopersicum45.0953.7183.29413forward
CNT30240569Lactuca sativaAvena sativa18.5626.3282.94170forward
CNT30309861Lactuca sativaCamelina sativa20.0929.6888.59184forward
CNT30613891Lactuca sativaArabis alpina21.1848.1486.6194forward
CNT30720053Lactuca sativaTriticum spelta19.8761.981.32182forward
CNT30477972Lactuca sativaArabidopsis halleri36.7997.483.38337forward
CNT30622400Lactuca sativaCajanus cajan35.9235.9679.33329forward
CNT30414942Lactuca sativaPapaver somniferum42.2547.682.43387forward
CNT30328607Lactuca sativaAsparagus officinalis14.8523.7882.35136forward
CNT3051266Lactuca sativaCucumis sativus40.945081.6375forward

Expression of CNT30358481

Peptides detected in this lncRNA

>peptide 1 (85 aa)
MNRAQICVFKEPNKVSFGSLLKSSHCGALESQIGFEILSDFSHKSLERKFPDQKLSALLVLSDLSQCDCSRPESVWLLHSAGGRS*

>peptide 2 (46 aa)
MFLNNCFSIDCVPESVCALLILPDLSQCDCSRPESVWLLHSAGGRS*

Sequence

>CNT30358481
TTTCATTCAATATATTATAAGATTTTAACAAACTCACAGAGATCAACATCAAACTAATCTAGATCAACATGCCAATATAAAAAATCAAAAGTCTAAGCCC
TCTCACCACGAATCCTACGAGCAAGCTGCATATCCTTCGGCATAATGGTGACCCTTTTAGCATGAATCGCGCACAGATTTGTGTCTTCAAAGAGCCCAAC
AAGGTAAGCTTCGGAAGCCTCCTGAAGAGCAGCCACTGCGGAGCTCTGGAATCGCAGATCGGTTTTGAAATCTTGAGCGATTTCTCTCACAAGTCTCTGG
AACGGAAGTTTCCTGATCAAAAGCTCAGTGCTCTTCTGGTACTTTCTGATCTCTCTCAATGCGACTGTTCCAGGCCTGAATCTGTGTGGCTTCTTCACTC
CGCCGGTGGCCGGAGCTGACTTCCTTGCTGCCTTGGTTGCCAACTGCTTCCTTGGAGCCTTTCCTCCGGTGGATTTCCTTGCCGTCTGCTTGGTACGAGC
CATTTGAATGTGATAAGAGAAGAGTGAAGAATTAACGATGTTCTTGAATAATTGTTTTTCGATTGATTGCGTGCCTGAATCTGTGTGTGCTCTTCTGATA
CTTCCTGATCTCTCTCAATGCGACTGTTCCAGGCCTGAATCTGTGTGGCTTCTTCACTCCGCCGGTGGCCGGAGCTGACTTCCTTGCCGCCTTGGTGGCC
AACTGCTTCCTTGGAGCCTTTCCTCCGGTGGATTTCCTTGCAGTCTGCTTGGTACGAGCCATTTGAACGTAAAAAAAGATTGGTGAATGGTGAAAGGTGA
AAATTAACGAAGCTCTGAAACGATTGTTGTGTAAGATGTGGATCTAGGATGAAGGATTTTTGGGAATTTTATACTACACGGATTTGGGGGAATAAGCGGC
AAAATTTCAAATTGTG