Detailed information on CNT30358465


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8VZC0|UXS1_ARATH, E-value = 2e-113

BLAST vs NONCODE:
NONTPRT002505, E-value = 6e-23

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30318541Lactuca sativaCorylus avellana2146.785.39219forward
CNT30500451Lactuca sativaCoffea canephora39.8838.9981.97416forward
CNT30727603Lactuca sativaCorchorus capsularis29.5362.3582.14308forward
CNT30637312Lactuca sativaCapsicum annuum40.4698.1483.89422forward
CNT3098150Lactuca sativaSolanum tuberosum26.0855.5181.99272forward
CNT30590847Lactuca sativaMusa acuminata24.1655.1481.35252forward
CNT30510868Lactuca sativaSolanum lycopersicum18.8994.7189.34197forward
CNT30134072Lactuca sativaLolium perenne20.5229.4879.44214forward
CNT30338563Lactuca sativaEragrostis tef16.0140.3480.84167forward
CNT30595456Lactuca sativaOryza meridionalis19.8536.3281.64207forward
CNT3054595Lactuca sativaAmborella trichopoda17.8389.8682.8186forward
CNT30325711Lactuca sativaAsparagus officinalis14.8648.5984.52155forward
CNT30497454Lactuca sativaDigitaria exilis20.4257.2680.28213forward
CNT30594668Lactuca sativaEragrostis curvula16.0149.5581.44167forward
CNT30723923Lactuca sativaLupinus angustifolius17.1687.3287.15179forward

Expression of CNT30358465

Peptides detected in this lncRNA

>peptide 1 (42 aa)
TYWIHMTPICFLLRMLKRISINLTCTCKQKSGANSLCKSQHV*

>peptide 2 (70 aa)
MNRGSRASKMIDLINFQQNGFYDIVSNQFESRVNEMMFHILFSTCKEIIDHYHFITSRNQFINQMTSYEP*

Sequence

>CNT30358465
ACCTATTGGATTCACATGACCCCAATATGTTTCCTTTTGAGGATGCTCAAGAGGATCTCCATAAACCTCACTTGTACTTGTAAGCAAAAATCTGGCGCCA
ATTCTCTTTGCAAGTCCCAACATGTTTAGGGTTCCCATTACATTCGATATGATGGTTTTGACGGGATTATACTTGTAATGAACAGGGGAAGCAGGGCAAG
CAAGATGATAGATCTGATCAACTTCCAACAAAATGGGTTCTACGACATCGTGTCTAATCAATTCGAATCGAGGGTTAACGAAATGATGTTCCACATTCTC
TTTTCTACCTGTAAAGAAATTATCGATCACTATCACTTCATCACCTCTCGCAATCAATTTATCAACCAAATGACTTCCTACGAACCCTGATCCACCAGTC
ACCACCACCCGCATCCTCTTCCGCCCAATTCCCACAGGAATCCGGCCTGTCGCACCGTGGGTAGCTGGCCGGCTGTAGTGGGTGTTGGTGTCACGTTGAG
AGAATGAAACTGCTCGCATTGAGGGTAATTCATTGCTAGTAACAGTGTCGATTGAGGAAACGGTAGATAATGATGGTTGATAGATGAAGAAGACGGAGCC
GATGAGGATTCCGACTAGGGTGAAGAGAAGGCGTTGTTCTTTGAGGATGTAATTCACGGATAGTGAAATAGATCTGACTGCTGATGTGTGTTTGAGGGAT
TTGGGGGAGTAAGGTGGGATTTCATGGGGAGACATCATCTCTTCATCTCTTCTATGGTTTGCGCTTGGATGTTTGTGTAATTGCTTCATATTGTTCATTG
TTTTTTCTCTGGTTTTGAAGAGATTGCTGGTTAACTTTGGTTCATGAGAAAGATGTGTGAAAGTATGATTCACTTGTAACGATTTCCAGTGAACGAACAA
AGGTTTGGCGTTCTTCGAAGCTAGAGGGTGGTTGGGAGATGGATCCCCCTTAGCTACTTGTTATGGGGAAGAAGGAAAAAAAAACAGTTAGCAGGGTATT
AAGACATGATTATTGTCAATATATGTAACTACGTAATTTTTTT