Detailed information on CNT3035823


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30206613Cucumis meloHelianthus annuus47.1173.5994.921279forward
CNT3027145Cucumis meloPopulus trichocarpa46.376.8396.741257reverse complement

Expression of CNT3035823

Peptides detected in this lncRNA

>peptide 1 (29 aa)
ASSHMLVSKIKPCMCKYELIQTVKLRMAH*

>peptide 2 (51 aa)
MRIETAAYAQAFVTPVETSPSRSWLAARAFWRASASVRSWHRPVGSPFDPS*

>peptide 3 (36 aa)
MITRRIARPSCRRRIIQISALSTFDGRIVAYYGGDG*

>peptide 4 (76 aa)
MQPQSGGKFCPRLNMGERPIANKYREGKMKRTLKRESIVLEIVGREADGGRRCAPVGCGTVMSRSANRLGAWTDAD*

>peptide 5 (85 aa)
MCPSRMWNGDEPVRQSTWGMDRCGLRRRPTPRPLLRLWRRRRHDRGWQRAPSGGLRHLCAPGIGLWAPHSTRLETRTKESDMCAS*

Sequence

>CNT3035823
CTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACTAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTA
TAGTTTGTTTGATGGTATCTGTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATA
AAGGTCGACGCGGGCTCTGCCCGTTGCTCTGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCT
ATCAACTTTCGATGGTAGGATAGTGGCCTACTATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCCC
ATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTTCGAGTCTGGTAATTGGAA
TGAGTACAATCTAAATCCCTTAACGAGGATCAATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGAC
CTCAGCCTGCTAACTAGCTATGCGGAGGTACCCCTCCGCGGCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCAAGGAAGTTTGAGGCAATAACAGGT
CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTCTATAGCCTTGGCCGACAGGCCCGGGTAATCTTTGAAATTT
CATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTG
AAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGCTTGAGAATCGGGCGTCCTCGACGTCCGAATTGTAGTCTGGAGAA
GCGTCCTCAGCGGCGGACCGGGCACAAGTCCCCTGGAAGGGGGCGCCAGAGAGGGTGAGAGCCCCGTTGCGCTCGGACCCTGTCGCACCACGAGGCGCTG
TCAACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCTGTCCAAGGCTAAATATGGGCGAGAGACCGATAGCAAACAAGTACCGCGA
GGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAATAGTGCTTGAAATTGTCGGGAGGGAAGCGGATGGGGGCCGGCGATGTGCCCCAGTCGGATGTGGA
ACGGTGATGAGCCGGTCCGCCAATCGACTTGGGGCATGGACCGATGCGGATTGAGACGGCGGCCTACGCCCAGGCCTTTGTTACGCCTGTGGAGACGTCG
CCGTCACGATCGTGGCTGGCAGCGCGCGCCTTCTGGCGGGCTTCGGCATCTGTGCGCTCCTGGCATCGGCCTGTGGGCTCCCCATTCGACCCGTCTTGAA
ACACGGACCAAGGAGTCTGACATGTGTGCGAGTTAACGGGCGAGTAAACCCGTAAGGCGCAAGGAAGCTGACTGGTGGGATCCCCTAGTGGGTTGCACCA
CCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAA
ACTCTGGTGGAGGCCCGTAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCT
CCGAAGTTTCCCTCAGGATAGCTGGAGCCCGCGGGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTC
AAACTTTAAATAGGTAGGACGGTGTGGCTGCTTTGTTGAGCCACACCACGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGC
GGGATGAACCGGAAGCCGGGTTACGGTGCCTAACTACGCGCTAACCTAGATCCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAA
GTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCTATACCCGGCCGTCGGG
GCAAGAGCCAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTTGGGCGTGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTA
GTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGACGGGGGA
AACCCGTCTGATAGCGCGACAGCGCGAACTTCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGCTGACGGCAACGTAAGGGATTCCGGA
GACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGTGGCTGGAAGAG
CACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCTCTCACGCCCGGTCGTACTCATAACCGCATCAGG
TCTCCAAGGTGAAAC