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Detailed information on CNT30358201


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XR61|MTK1_ORYSJ, E-value = 2e-63

BLAST vs NONCODE:
NONORUT004830, E-value = 3e-21

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30590425Lactuca sativaMusa acuminata19.243483.09136forward
CNT30101583Lactuca sativaOryza rufipogon21.075.9583.89149forward

Expression of CNT30358201

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MKTTYFSVIPLIHMSILCKISQKQVSNKSTNVKPHWPIESKFWVNDLS*

>peptide 2 (68 aa)
MEQIHHVFLFHKLPKLQIVINFMKVCLTRSLFMYIPKRCKLFIKKIPSVCYRIHYPCFICLYSQYLPL*

>peptide 3 (34 aa)
ELLLSHRDNINNGVEISSFLHKIFGKVKSPSFTI*

>peptide 4 (37 aa)
MVLKFLRFFIRFLAKSRALRSQSDLFTRSLIDSKSST*

Sequence

>CNT30358201
TGGAGTTGTTACTAAGCCACAGAGATAACATCAATAATGGTGTTGAAATTTCTTCGTTTCTTCATAAGATTTTTGGCAAAGTCAAGAGCCCTTCGTTCAC
AATCTGATCTTTTCACAAGATCACTAATCGACTCAAAATCCTCCACATGAGCCACCCCAACAATTCGCCTGCAAATCAAAGGGCAATTTAGACATTTCAC
AAACAATCAAACAGCTCAAAAAATTACATTACCTTATCATTTTGGCAGCAGCAAATCCAAGAGAATCATGGAACAAATCCATCATGTATTTCTGTTTCAC
AAGCTCCCGAAGCTCCAAATCGTTATAAATTTCATGAAGGTATGCCTCACCAGGTCCCTCTTTATGTATATCCCAAAGAGATGTAAACTTTTTATAAAAA
AGATTCCAAGTGTCTGCTATCGTATCCATTATCCATGCTTTATATGTCTGTATTCACAATATTTACCACTTTAAAACCCAAAACCTTTTAAAAGCATAAT
TACAAATCAAATGAAAACTACATACTTTTCTGTCATTCCCTTGATCCACATGTCCATCTTGTGCAAAATAAGCCAAAAACAAGTTTCCAATAAAAGCACC
AATGTCAAACCCCATTGGCCCATAGAAAGCAAATTCTGGGTCAATGACTTGAGTTGACTCATGTGTAACCATGACAGAACCAGTATGGAGATCACCATGT
ATTAAAG