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Detailed information on CNT30357963


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9S7M0|CB3_ARATH, E-value = 6e-139

BLAST vs NONCODE:
NONBNAT003428, E-value = 3e-33

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639243Lactuca sativaNymphaea colorata37.0627.0781.18255forward
CNT30629897Lactuca sativaVigna unguiculata26.3114.7883.43181forward
CNT30710854Lactuca sativaGlycine max31.2514.4284.19215forward
CNT30207651Lactuca sativaHelianthus annuus42.7325.5291.84294forward

Expression of CNT30357963

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MPRDQQTNQLYPNHSRLGIHRSGRMVFEPKMGPSTSHGLVHTTSHF

>peptide 2 (31 aa)
LHQTDKFTRKLKEPQKLMNQGRTWWHRPMHC*

>peptide 3 (36 aa)
MEPSAPSIAHRPWITSRARFLANASGSADKPAVSQP*

Sequence

>CNT30357963
TTCTTCATCAAACTGATAAGTTTACAAGAAAACTCAAGGAGCCACAAAAACTTATGAACCAGGGGCGAACTTGGTGGCATAGACCCATGCATTGTTAGCC
ACAGGGTCATCCAAATGGTCCAAAAGGTTCTCCAATGGTCCTTTCCCTGTTACAATTGCTTGAACAAAAAACCCAAACATTGAAAACATTGCTAGTCTTC
CATTCTTGATTTCCTTCACTTTCAACTCGGCAAAGGTAACCGGGTCGTCAGCAAGTCCCAACGGGTCAAAATACTGACCACCCGGGTACAAGTTGTTACC
ATCTCCAACACCATCGAGCCCGTTGATACGGAACCCTTCGACTAGTATGCTTTGTGCGTGGACCAGGTTAGGGTTGCCCAAGTAGTCTAGCCCACCTTCT
GAGAAGATTTGGGATCCGGCTTTGAACCAAACGGGCTCCTTGAAATCCACTTTGACCCATTTTGCAAGGACTTCGGGCGTGATGGAGCCCAGTGCTCCGA
GCATTGCCCATCGCCCGTGGATCACCTCAAGAGCCCGGTTTTTAGCGAATGCCTCGGGATCAGCAGACAAACCAGCTGTATCCCAACCATAGTCGCCTGG
GAATTCACCGGTCAGGTAGGATGGTGTTTGAGCCGAAAATGGGCCCAAGTACTTCACACGGTCTGGTCCATACCACAAGTCATTTCCC