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Detailed information on CNT3035780

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30512995	Cucumis melo	Juglans regia	22.84	20.48	82.35	119	forward
CNT30561835	Cucumis melo	Actinidia chinensis	26.3	15.59	83.94	137	forward

Expression of CNT3035780

Peptides detected in this lncRNA

>peptide 1 (43 aa)
FNATLIKTVPAAPCSARDILCLVLLVIRNHSRNTLNPQHIVCF*

>peptide 2 (55 aa)
MKERPGNYVYSRDVYSLTNPGFTPYLEQMGCDKNNKSPSKAQFQRTSSSKSNMGS*

>peptide 3 (40 aa)
MSNPKPVELKHKRTRCKAPRPPCGEGFVGVIQPFRRTART*

Sequence

>CNT3035780
CTTCAATGCAACACTTATTAAGACAGTTCCGGCCGCACCCTGTTCTGCGAGAGACATTCTCTGTCTCGTCCTCTTGGTAATTAGAAACCACAGTAGGAAC
ACGCTTAATCCTCAACATATCGTCTGCTTCTAATTCAAACCAAACCCAACACCAAAATCTCCCCACCCAAAACAAAGAAACGCAAAACAGAAACTTGCTG
ATGTCAAATCCTAAACCGGTAGAGCTAAAACACAAACGGACTCGTTGCAAAGCACCACGTCCGCCGTGCGGCGAAGGGTTTGTCGGAGTTATACAACCCT
TCCGTCGTACAGCCCGGACATGAAAGAACGACCGGGAAACTACGTGTATAGCCGTGATGTCTACAGCCTGACGAACCCGGGTTTTACCCCTTACCTCGAG
CAGATGGGTTGTGATAAAAACAATAAATCTCCTTCGAAAGCTCAATTCCAACGCACCAGTTCCTCAAAGTCGAACATGGGTAGTTGATTTTAAAGAGAAA
TCAGGAGAACCCAGATGGGGA