Detailed information on CNT30357719


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 3e-14

BLAST vs NONCODE:
NONVVIT003033, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3094274Lactuca sativaSolanum tuberosum12.4478.6499.57232forward
CNT30554477Lactuca sativaOryza glaberrima25.8466.6797.93482forward
CNT30605073Lactuca sativaGossypium raimondii68.7484.3498.281282forward
CNT3038287Lactuca sativaCucumis melo43.3853.9797.65809forward
CNT3099471Lactuca sativaOryza rufipogon11.2683.3398.57210forward

Expression of CNT30357719

Peptides detected in this lncRNA

>peptide 1 (35 aa)
HGTPGSLWPTFVSVRPVGLTVRQAYTITLTSRILA*

>peptide 2 (36 aa)
MFARWAECSPTSESSPLDNKKCPPLRSPNYDESFAF*

>peptide 3 (38 aa)
MAIVFFTGFIVTHVSILTSDISRSCHQKPSPIDRTFRY*

>peptide 4 (45 aa)
RDSRITMADFRLCSTSRSHSQAGLYHYAHEQNLSLSLPSHTSVTL*

>peptide 5 (62 aa)
MCRFPNQKIGEHPFSRSYGVILPSSFDMVLSSALVYSSCSRVSVWGTVSSLGGSPSQFEVFS*

>peptide 6 (33 aa)
TGLPDHYGRLSSLFDQSVSQSGRLIPLRSRAES*

>peptide 7 (34 aa)
MTTVATINRLATMAGRYALLSRDPYSNQKTKGPY*

Sequence

>CNT30357719
CACGGGACTCCCGGATCACTATGGCCGACTTTCGTCTCTGTTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCACGAGCAGAATCT
TAGCTTGAGCCTACCTTCGCACACCTCCGTTACTCTTTAGGAGGCATCCTTAGACGAAAGAGTGGTCTTTCAGGATTGGTCGTTGTGTGTCACCACCTCC
CACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTAAAGGTGCACGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGA
GAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGG
ACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCTTATAACACTTCTCCTTCCGACTTTCCAGCACCGGGCAGGTGTCAGACTCTATA
CATCGTGTTACCACTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAATCAAAAGATAGGAGAGCACCCCTT
CTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTAGTTGTTCACGTGTGTCAGTTTGGGGTACG
GTCAGTTCACTGGGAGGATCGCCCTCCCAATTCGAAGTTTTTTCCTAGAAGTTTCAACCTTGTTGACTATGACAACAGTCGCGACTATAAACAGACTCGC
GACTATGGCAGGGCGGTACGCTCTGCTCTCTCGCGACCCCTACTCTAATCAAAAGACTAAAGGCCCCTACTGAAGATTCAAAGGGCGAGCACTTAAATGA
GAAAGGCTTGTAGACTCGTGACGCTGAACGAGACATTCGAAAACTAAAGCGCACACTAGAAAGTGCTTCGAAAGGTGTCAGCAGGTGCGCGGAGCCGGAG
CCCGGCATGTTCGCCCGCTGGGCCGAGTGTTCGCCCACTTCAGAGTCTTCGCCTTTAGATAACAAAAAGTGTCCGCCCCTTAGGTCGCCAAACTACGACG
AGAGTTTCGCCTTTTGAAGCGCCAGTCGCGTAGGGCGACCGGGCCAGGCCGAGTCAGAAAGGCTTTGATGACTCAAGGTTCATATTAGGGAAAGGAGAGT
GAGGGGAAGAGGGGGCAGCCCTCGGCCCGATCATCCAATTCGCTCCAACAGACATGCATGGTTCTGTAGTCAAAGCAACTTCTTCCCTTTCGTGTACCCA
TCGGACGGCAGCCCTTTCGGGGGTTCCTTAGGGACCGATTCACTCTGCGTAGATTGACTGAACGCAGAAAACCTTCCACTGGATGGCGATCGTGTTTTTC
ACAGGATTTATCGTTACTCATGTCAGCATTCTCACTTCTGATATCTCCAGGTCTTGTCACCAAAAACCTTCCCCGATTGACAGAACGTTCCGCTACTGAC
ACTTGAAAAAGCTGCTTTCAAGGTCTCGTCGCTTCGGTGAATCACTTGAGCCTTGATACATTTTCGGTGCCATGGAGCTAGACCAGTGAGCTATTACGCT
TTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCGCTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGAT
CTGGGCTGTTTCCCTCTCGACTTTGGATCTTAGCACCCAAAAAGTCTGTCTGTACAAACGATCTAGGCCTGTATTCGGAGTTTCCTTGGGGTTGGTAAGG
CGAAATGGGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTACT