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Detailed information on CNT30357026


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40250|RBS_LACSA, E-value = 9e-63

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727195Lactuca sativaCorchorus capsularis33.6513.1981.78214forward
CNT30712618Lactuca sativaGlycine max33.3336.382.55212forward
CNT30613234Lactuca sativaArabis alpina23.4326.1484.56149forward
CNT30620550Lactuca sativaCajanus cajan33.8117.9584.65215forward

Expression of CNT30357026

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MKLMHCTWRTLSNPITRMKALGYSFLHSPISFMT*

Sequence

>CNT30357026
GCACAACTCAAAACATAAGGAGATGGAAGCATACATTTAACCACAAATAAATATTTTATACGTTTCCCTTTATCCACCTCATACAAATTCGGGAATGAAC
AACGAAACATACAGAAAATCTGAAAATCGACAAATTCGCATATAAGTAAAAAGAAATTAATGAAGAACCCTAAAGGTTCAACAAACCCAACCCATTATAA
CCAGATTAAATCGCTTAGAGAACGCCTGGTGGTTTGGAAACAATGAAACTGATGCATTGCACTTGGCGAACATTGTCAAATCCGATAACACGGATGAAGG
CGTTGGGGTACTCCTTCTTGCACTCTCCGATCTCCTTCATGACCTGAGCTGAGTCAGTGCACCCAAACATAGGCAACTTCCACATTGTCCAGTAGCGTCC
ATCATAGTATCCGGGGGAGTGGTGGTGCTCACGGTAGTCAACTTCCTTAGCCAAAGAAGCATCAGATAGAGGGGGCAAATATGAAAGAGTCTCGAACTTC
TTGAGCCCTAGAGTTGGACTTGAGGCCGGTGAACGGAGCCACGGCTTGAGCGGGGGCAGCACGGCTGACAGTGGCTACTGCAGAGGAGATCGAGGCCATT
TTAGTAATTTTACTTTAAGGCTACCCTTTGCAAATT