Detailed information on CNT30356986


BLAST search results

BLAST vs Swiss-Prot:
sp|P46486|PSAF_FLATR, E-value = 1e-58

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618192Lactuca sativaSesamum indicum17.3220.0485.29102forward
CNT3019440Lactuca sativaCitrullus lanatus17.3226.9183.33102forward
CNT30313614Lactuca sativaCamelina sativa17.3226.2985.29102forward
CNT30320781Lactuca sativaAsparagus officinalis31.9222.9380.85188forward
CNT3038681Lactuca sativaCucumis melo17.1525.1982.18101forward
CNT3040196Lactuca sativaMarchantia polymorpha15.1131.2383.1589forward

Expression of CNT30356986

Peptides detected in this lncRNA

>peptide 1 (93 aa)
MSAEAGSAGIVDETKMEERARAADQAFNDPFSLLLSSVAPEQTMLLLVITFNLDPNCEDLEISSGWKKLVEIVKAISSDLFVEMLERMMMELV*

Sequence

>CNT30356986
AATAAGTTCGCCATTCAACAACTCACGATAAGCAGCAACTGGCCAAATAAACCCACGGAATACCAAACTTGAAGCCAATGGAACATCGATGATGATCTCT
TTCATTGTAGGCTTCTTCTCATCCCTAATAGCAATCAAATAACTCCTTCCAACCCACCCAATCCATCCAGCAATTGCAGGAGCACTCTCGGGGGCGTAAA
GCTTGAGAGAGCTTTCAAGCTTCTTCAGCGACTGCTTCTCTCTCTTGGCGAACTGTTTGGACTCTTTACACGGAGTGAGTCCGGAGATGTCGGCGGAGGC
TGGAAGCGCCGGGATAGTCGACGAAACCAAGATGGAAGAGAGAGCGAGAGCTGCCGACCAGGCTTTTAACGATCCCTTTTCATTGCTTTTGTCTTCTGTT
GCACCAGAACAGACGATGTTGTTGCTGGTGATCACCTTCAATTTGGATCCGAACTGCGAGGATTTGGAGATTTCGAGTGGTTGGAAGAAGCTTGTGGAGA
TTGTGAAAGCCATCTCCTCCGATCTGTTTGTTGAAATGCTTGAGAGAATGATGATGGAATTAGTATGAAGAAATAGAAATGGATGGTGG