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Detailed information on CNT30356968


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SQL2|CB24_PEA, E-value = 6e-110

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631290Lactuca sativaVigna unguiculata8.7923.5385.5376forward
CNT30487770Lactuca sativaOlea europaea30.9859.4282.84268forward
CNT30554639Lactuca sativaOryza glaberrima9.9432.4583.7286forward
CNT30144765Lactuca sativaMedicago truncatula9.3626.8288.8981forward
CNT30205828Lactuca sativaHelianthus annuus33.4175.0683.74289forward
CNT30723301Lactuca sativaLupinus angustifolius15.6131.6281.48135forward

Expression of CNT30356968

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MNSITNKVEDDAKYSDFPASYHLGTLSMPALVKTSGNSIPATPNMAHLPFTSSACTNHFKFSGSSAKATGS*

>peptide 2 (34 aa)
LRSKVQNSCTTHSLQTQQHSSFSPRSLAFQPQHL*

>peptide 3 (47 aa)
MGPTSVAIGYQMALSQSHCVEPRIPRTPTLPVSLQLFRHSINVIICT*

Sequence

>CNT30356968
GCTTAGATCTAAAGTTCAGAACTCATGCACCACTCATAGCTTACAAACACAACAACATTCTTCTTTTTCACCTCGATCTTTAGCCTTTCAGCCACAACAT
CTTTAGTTTCCAGAAAGTGTTTGGACAATGGTGTTGTGCCATGGGTCCGACAAGTGTTGCAATAGGTTATCAAATGGCCCTTTCCCAGTCACATTGTGTT
GAACCACGAATCCCAAGAACGCCAACATTGCCAGTCTCCCTGCAGTTATTTAGACATAGTATTAATGTTATTATTTGTACGTAAGACAATTATAAATAGA
TAATCGTAAATTGTAATGTGGGTAAGATAGATTTATACCATTGGCAATCTCTTTATCCTTGGCTTCAGCTGTTGGTGCAAAATTTAGGGGGTTAAATATG
CCACCTGGGTACCCAACTTCGTTAGGAGGCAAGCTGTAGCTTTTAAAGATTGGATCTTGATTAACACTTCCTGGATTCTTGATGTCTTGCCACCTTCTGA
TCTCTACGTAGTGGAACAAGATGAACTCAATAACCAACAAAGTCGAGGACGATGCAAAGTATTCAGACTTTCCGGCGTCGTACCACTTAGGAACATTGAG
TATGCCAGCGCTTGTCAAAACCTCCGGCAATAGCATTCCGGCGACACCCAACATGGCCCACCTCCCATTCACAAGCTCAGCTTGTACAAACCACTTCAAG
TTCTCAGGGTCCTCTGCCAAGGCAACTGGATCTTGAGGCGCATGGCCGGAAAACGGCGACTGAGGCTTGTGTGACGGTGGCCATGTTTTCCGGCGGGATG
AAAGAAGGGGTTTGTGGATTGTGTTGTTGAGGTGAGTTGAAGATTTCTGTTTGTGTCACCTTTTG