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Detailed information on CNT30356932


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 8e-12

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696398Lactuca sativaOryza sativa24.1999.5896.87479forward
CNT30702366Lactuca sativaQuercus lobata28.2856.2297.86560reverse complement
CNT30234026Lactuca sativaBrassica oleracea19.0995.2195.24378reverse complement

Expression of CNT30356932

Peptides detected in this lncRNA

>peptide 1 (84 aa)
MPGSGSAHLLTPFEALSSVRFSFRMSRSASRVYKPFSFKCSPFESSVGAFSLLIRVGVVREQSVPPCHSREYVYSCDCCHSQQG*

>peptide 2 (50 aa)
MTTRRWAWKQPSFEESVIAHWSSSMAPKMYQGSSDSPKRRDLESSFFKCQ*

>peptide 3 (45 aa)
MSNDKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

>peptide 4 (36 aa)
AKSISVERMMSMARGRALNGLGWPHFALPTPRKLRI*

Sequence

>CNT30356932
CGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCATTTCGCCTTACCAACCCCAAGGAAA
CTCCGAATATAGGCCTAGATCGTTTGTACAGACAAACTTTTTGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTA
AGCAATCACTTAGTGGAAAAGGAAGTGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTGGTC
TAGCTCCATGGCACCGAAAATGTATCAGGGCTCAAGTGATTCACCGAAGCGACGAGACCTTGAAAGCAGCTTTTTCAAGTGTCAGTAGCGGAACGTTCTG
TCAATCGGGGAAGGTTTTTGGTGACAAGACCTGGAGATATCAGAAGTGAGAATGCTGACATGAGTAACGATAAATCCTGTGAAAAACACGATCGCCTGCC
AGTGGAAGGTTTTCTGCGTTCAGTCAATCTACGCAGAGTGAATCGGTCCCTAAGGAACCCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGA
AGTTGCTTTGACTACAGAACCATGCCTGTCTGTTGGAGCGAATTGGATGATTGGGACGAGGTCTGCCCCCTTTTCCCCTCACTCTCATTTCCCTAATATG
AACCTTGAGTCATCAAAGCCTTTCTGAATCGGCCTGGCCCGATCGCCCTACGCGACTGGCGCTTCAAAAGGCGAAACTCTCGTCGTAGTTTGGCGACCTA
AGGGGCGGACACTTTTTGTTATCTAAAGGCGAAGACTCTGAAGTGGGCGAACACTCGGCCCAGCGGGCGAACATGCCGGGCTCCGGCTCCGCGCACCTGC
TGACACCTTTCGAAGCACTTTCTAGTGTGCGCTTTAGTTTTCGAATGTCTCGTTCAGCGTCACGAGTCTACAAGCCTTTCTCATTTAAGTGCTCGCCCTT
TGAATCTTCAGTAGGGGCCTTTAGTCTTTTGATTAGAGTAGGGGTCGTGAGAGAGCAGAGCGTGCCGCCCTGCCATAGTCGCGAGTATGTTTATAGTTGC
GACTGTTGTCATAGTCAACAAGGTTGAAACTTCCAGGAAAAAACTTTGAATTGGGAGGACGATCCTCTCGGTGAACTGACCGTACCCCAAACCGACACAG
GTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTCTCCTATCTT
TTGATTAGGAAAGCGGCACATACCAGGGGGTAGCGACTGTTTATTAAAAACACAAGACTTTGCTAAGTGGTAACACGATATATAGAGTCTGACACCTTCC
CGGTGCTGGAAAGTCGGAAGGAGAAGTGTTACAAGCTTTGAATGGAAGCCCCAGTAAACGGCGGCAGTAACTCTAACTGTCCTAAGGTAGCGAAATTCCT
TGTCGCATAAGTAGCGACCTGCACGAGTGGTGTAACGACTGCCCCGTTGTCTCCGACATGGACCCGATGAAATTGAATTCTCCGTGAAGATGCGGAGTAC
CAACGGCTAGACGGTAAGACCCCGTGCACCTTTACTATAGCTTCGCAGTGACAACCTTGATCGAATGTGTAGGATAGGTGGGAGGTGGTGACACACAACG
ACCAATCCTGAAAGACCACTCTTTCGTCTAAGGATGCCTAACCGCCGCACCGATCATTCGGGGGGGGGGGGGACACTGCGAGGTGGGTAGTTTATCTGGG
GCGGATGCCTCCTAAAGAGTAACGGAGGTGTGCGAAGGTAGGCTCAAGCTAAGATTCTGATCGTGAGCGTAATGGTATAAGCCTGCCTGACTGTGAGACC
GACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGAGTCCTGTGTGGAAGGGCTCTCGCTCAACGGCTCTAAC