Detailed information on CNT30356895


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONTPRT002153, E-value = 4e-101

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376617Lactuca sativaArabidopsis thaliana82.0472.7982.46781forward
CNT30728102Lactuca sativaCorchorus capsularis90.3457.0783.6860forward
CNT30380449Lactuca sativaManihot esculenta70.0668.1383.81667forward
CNT3097183Lactuca sativaSolanum tuberosum90.6582.1983.78863forward
CNT30609156Lactuca sativaGossypium raimondii90.0266.3384.01857forward
CNT30643414Lactuca sativaCannabis sativa90.3481.7581.98860forward
CNT3032244Lactuca sativaTheobroma cacao90.3474.8583.37860forward
CNT3036185Lactuca sativaCucumis melo51.5847.8185.95491forward
CNT3051129Lactuca sativaCucumis sativus89.0895.8283.49848forward
CNT30114615Lactuca sativaEutrema salsugineum90.5587.8784.45862forward

Expression of CNT30356895

Peptides detected in this lncRNA

>peptide 1 (96 aa)
MKSRLLLDIIIRQSPPILQLLSGEDQPLLVRWDPLLVLNLRLHIINRVRTLHLQSNRLPCQCLHENLHPSPQPQHKVKRRLLLDVVIRQSPGSAVF*

>peptide 2 (72 aa)
MSSRKSASLPSASTQGEASTPSGCCNPPKSGFCRLLAVFRRRSISVGLGEFLPCPGSWPSRCRWCRSSPPPR*

>peptide 3 (92 aa)
RVSITTQTFKHTQIHSSTTFITPPNQTFNFHHEDEGQDEESTPSGYYNPPKSAHPPAAFRRRSTAVGPVGSPPCPESSPSHYQSCQNSPPPK*

>peptide 4 (40 aa)
MVSELSTSKVMVFPVKVFTKICMPPRRRRTKWRVDSFWML*

>peptide 5 (48 aa)
MEGGLLLDVVIGQSPAVLELLSGEDKSLLVWGNPFLVLDFRLDVVYGVG

>peptide 6 (38 aa)
QSFNHNTNIQTYTNSFINNLHNTTKPNLQFPPRRRRTR*

>peptide 7 (40 aa)
MVSELSTSRVMVFPVRVLTNICIPPRRRRTRWRVDSFWML*

Sequence

>CNT30356895
CAGAGTTTCAATCACAACACAAACATTCAAACATACACAAATTCATTCATCAACAACCTTCATAACACCACCAAACCAAACCTTCAATTTCCACCACGAA
GACGAAGGACAAGATGAAGAGTCGACTCCTTCTGGATATTATAATCCGCCAAAGTCCGCCCATCCTCCAGCTGCTTTCCGGCGAAGATCAACCGCTGTTG
GTCCGGTGGGATCCCCTCCTTGTCCTGAATCTTCGCCTTCACATTATCAATCGTGTCAGAACTCTCCACCTCCAAAGTAATCGTCTTCCCTGTCAATGTC
TTCACGAAAATCTGCATCCCTCCCCTCAGCCTCAACACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCCGCCAAAGTCCGGGTTCTGCCGTCTT
CTAGCTGTTTTCCGGCGAAGATCAATCTCTGTTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTCTC
CACCTCCAAGGTGATGGTTTTTCCGGTCAAGGTTTTCACAAAGATCTGCATGCCACCACGGAGACGGAGGACCAAATGGAGGGTTGACTCCTTTTGGATG
TTGTAGTCGGCGAGGGTACGGCCGTCTTCTAGCTGTTTTCCGGCGAAGATCAATCTTTGCTGATCTGGGGGGATACCTTCCTTGTCTTGGATCTTGGCTT
TCACGTTATCGATGGTGTCGGAGCTTTCGACCTCGAGAGTGATGGTCTTTCCGGTAAGAGTTTTGACGAATATTTGCATACCTCCACGAAGACGGAGGAC
GAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGCCAAAGTCCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATAAGTCTTTGCTGGTCTGGGGGA
ATCCCTTCCTTGTCTTGGATTTTCGCCTTGACGTTGTCTATGGTGTCGGAGC