Detailed information on CNT30356611


BLAST search results

BLAST vs Swiss-Prot:
sp|Q41951|TIP21_ARATH, E-value = 4e-18

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30102065Lactuca sativaOryza rufipogon23.5110.6187.363forward
CNT30333449Lactuca sativaCynara cardunculus27.2412.1787.6773forward

Expression of CNT30356611

Peptides detected in this lncRNA

>peptide 1 (69 aa)
QASGDEAEKDACDGGAKKLSDPVKHAGKDGDLAADGQTEGGDELCNVGFDRAATEGVTQTTNGDSRHFV*

Sequence

>CNT30356611
CCAGGCCTCCGGTGACGAAGCTGAGAAAGATGCATGCGACGGTGGAGCCAAGAAGTTGAGCGATCCAGTAAAACACGCCGGTAAGGACGGTGATCTGGCC
GCCGACGGCCAAACCGAAGGTGGAGATGAACTCTGCAATGTAGGCTTTGATAGAGCTGCCACTGAAGGAGTCACCCAAACTACCAATGGCGATTCCAGGC
ATTTTGTGTAGAGTATTGTATTAATGGATAAGGAATAGCTGAATTTGGAAAGGAGATGGAAATAGAAA