Detailed information on CNT30356415


BLAST search results

BLAST vs Swiss-Prot:
sp|P29302|PSAD_NICSY, E-value = 4e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30197643Lactuca sativaPisum sativum23.9237.3987.9583forward
CNT30215427Lactuca sativaHelianthus annuus36.8935.8586.72128forward
CNT3035037Lactuca sativaCucumis melo31.993784.68111forward
CNT30148465Lactuca sativaBrachypodium distachyon24.7811.0886.0586forward

Expression of CNT30356415

Peptides detected in this lncRNA

>peptide 1 (83 aa)
SASRRHLEDLLLGGFPCDDVELLHLSFSEQSTGASSEDGRWGVGVEFRWGESNWSFFSGGGNLFGCCLDGEGTGGLFPWRNRV*

>peptide 2 (73 aa)
MGDGVLGSSSGGVNPTGASLVGVATSSAAALMVKVREDCFHGETGFESVGVKREACAAMAIEDCRWMKMVRCL*

Sequence

>CNT30356415
CAGCGCCTCCCGTCGGCATCTCGAAGATCTGCTCCTTGGGGGATTCCCATGTGATGACGTAGAACTCCTCCACCTGAGCTTTTCGGAGCAATCCACCGGT
GCTTCCAGCGAAGATGGGAGATGGGGTGTTGGGGTCGAGTTCCGGTGGGGTGAATCCAACTGGAGCTTCTTTAGTGGGGGTGGCAACCTCTTCGGCTGCT
GCCTTGATGGTGAAGGTACGGGAGGACTGTTTCCATGGAGAAACAGGGTTTGAGAGCGTTGGGGTGAAGAGAGAAGCTTGTGCAGCCATGGCCATTGAAG
ATTGTAGATGGATGAAGATGGTGAGGTGTTTGTGAGGGTGGGAGATG