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Detailed information on CNT30356360


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT003133, E-value = 6e-171

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30362056Lactuca sativaSorghum bicolor10.3424.5198.02101reverse complement

Expression of CNT30356360

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MPGSGSAHLLTPFEALSSVRFSFRMSRSTSRVY*

>peptide 2 (71 aa)
SVAERSVNRGRFLVTRPGDIRSENADMSNDKSCEKHDRLPVEGFLRSVNLRRVNRSLRNPRKGCRPMGTRK*

Sequence

>CNT30356360
TCAGTAGCGGAACGTTCTGTCAATCGGGGAAGGTTTTTGGTGACAAGACCTGGAGATATCAGAAGTGAGAATGCTGACATGAGTAACGATAAATCCTGTG
AAAAACACGATCGCCTGCCAGTGGAAGGTTTTCTGCGTTCAGTCAATCTACGCAGAGTGAATCGGTCCCTAAGGAACCCCCGAAAGGGCTGCCGTCCGAT
GGGTACACGAAAGTGACGAAGTTGCTTTGACTATAGAACCATGCCTTTCTGTTGGAGCGAATTGGATGATCGGGCCGAGGGCTGCCCCCTCTTCCCCACA
CTCTCCTTTCCCTAATATGAACCTTGTGTCATCAAAGCCTTTCTGACTCGGCCTGGCCCGGTCGCCCTACGATATTGGCGCTTCAAAAGGCGAAACTCTC
GTCGTAGTTTGGCGACCTAAGGGGCGGACACTTTTTGTTATCTAAAGGCGAAGACTCTGAAGTGGGCGAACACTCGGCCCAGCGGGCGAACATGCCGGGC
TCCGGCTCCGCGCACCTGCTGACACCTTTCGAAGCACTTTCTAGTGTGCGCTTTAGTTTTCGAATGTCTCGTTCAACGTCACGAGTCTACTAGCCTTTCT
CATTTAAGTGCTCGCCCTTTGAATCTTCAGTGGGGGCCTTTAGTCTTTTGATTAGAGAAGGGGTCGCGAGAGAGCAGAGCGTACCGCCCTGCCATAGTCG
CGAGTCTGTTTATAGTCGCGACTGTTGTCATAGTCAACAAGGTTGAAACTTCCAGGAAAAAACTTCGAATTGGGAGGGCGATCCTCCCGGTGAACTGACC
GTACCCCAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCGTGTCGAAGGAACTTGGCAAAATGACCCCGTAACTTCGGGAGA
AGGGGTGCTCTCCTATATTTTGATTAGGAAAGCGGCACATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGAC