Detailed information on CNT30356344


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000299, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639077Lactuca sativaCapsicum annuum44.1860.6892.51014forward
CNT30311323Lactuca sativaCamelina sativa48.9378.6491.721123forward
CNT30212627Lactuca sativaHelianthus annuus42.6196.0793.46978forward
CNT30719706Lactuca sativaMalus domestica golden47.4593.9691.741089forward
CNT30336076Lactuca sativaCynara cardunculus44.1836.192.411014forward

Expression of CNT30356344

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MCASQRVSKPARRKEADWRDPPSGVHRRPTLIF*

>peptide 2 (34 aa)
MPIFLDPRPASAGRSGRRTLSGGEFGWGGTCFKR*

>peptide 3 (34 aa)
MNGLMRFPLSLSTIKRNHSEGNGLGRISGERRCC*

>peptide 4 (35 aa)
MKYNSHQVAGRILCRRLKYATGYCKWQSGLAATIH*

>peptide 5 (38 aa)
MALKRVTYTRPRTVDSHNWSSRLVEKPVARSYHALDYD*

>peptide 6 (40 aa)
MNRKPGYGAKLRANLEPTKGVGRLRQQDGGHGSRNPLRSV*

>peptide 7 (31 aa)
MRRVCPLPVCRPTVGASAPKGTCRWLSLCDG*

Sequence

>CNT30356344
ATTCCCTTAGTAACGGCAAGCGAACCGGGATCAGCCCAGCTTGAAAATTGGGCCACCTCGCTATCCGAAATGTAGTCTGGAGAAGCGTCCTCAGCGGCGG
AACGGGCCCAAGTCCCCTGGAAGGGGGCGCCAGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCTGCGAGTCGGGTTG
TTTGGGAATGCAGCCCCAATAGGGCGTCTGACATGTGTGCGAGTCAACGGGTGAGTAAACCCGCAAGGCGTAAGGAAGCTGATTGGCGGGATCCCCCTAG
CGGGGTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCG
AAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGT
AGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCCCGGGTGCGAGTTCTATCGGGTAAAGCGAATGATTAGAGGCATCGGGGGCGCAACGCCCT
CGACCTATTCTCAAACTTTAAATAGGTAGGACGGTGCGGCTGCTTTGTTGAGCCGTACCACGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAG
AACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCAAACTACGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACG
GTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTTAAGCGCGTGACCTACAC
CCGGCCAAGAACCGTTGATTCGCACAATTGGTCTTCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCATGCGCTGGATTATGACTGAACGCCTCTA
AGTCAGAATCCGGGCTAGAAGCGACGCGTGTGCCCGCCGCCTGTTTGCCGACCAGCAGTAGGGGCCTCGGCCCCCAAAGGCACGTGTCGTTGGCTAAGCC
TGTGCGACGGATGAGTCGTGCAGGCCGCCATGAAGTATAATTCCCATCAAGCGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATC
TAATTAGTGACGCGCATGAATGGATTAATGAGATTCCCACTGTCCCTGTCTACTATCAAGCGAAACCACAGTGAAGGGAACGGGCTTGGCAGAATCAGCG
GGGAAAGAAGATGCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGTATAAGTAGGAGCCTTCGGGCGAAAGTGAAATACCA
CTACTTTTAACGTTATTTTAGTTATTCCGTGAATTGGAAGCGGGGCAATGCCCATCTTTTTGGACCCAAGGCCTGCTTCGGCGGGCCGATCCGGGCGGAG
GACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATGTTTTAAAAGATAACGCAGGTGTACTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGTA
ATAGAAGGGTAAAATCTCGTTTGATTCTGATTTCCGGTACGAATACGAACTGTGAAAGCGTGGCCTAACGATCCTTTAGACCTTTGGAATTTGAAACTAG
AGGTGTCAGAAAATTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGGTTTTTTATCCTTCGATGTCGGCTCTTCCTATCAT
TGTGAAATAGAATTCACCAAGTGTTGGATTGTTCACCCATCAGTAGGAACGTGAGCTGGGTTTAGACCGTCGTGAGATAGATTAGTTTTACCATACTGAT
GGCAGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAACCATTGATTCTCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACC
GTGCGCTGGATTACGACTGAACGCATCTAAGTCAGAATCCGGGCTAGATGCGACGTGTGTGCCCGCTGCCTGTTTGCCGACCAACAGTAGGGGCCTCGGC
CCCTAAAGGCACGTGTCGTTGGCTAAGCCTGTGCGACGGATGAGTTGTGTAGGCCGCCATGAAGTATAATTCCCATCAAGTGGCGGGTAGAATCCTTTGC
AGACGACTTAAATACGCGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTAAGATTCAACCCTGTGTCGCTCAGATTCGTC