Detailed information on CNT3035626


BLAST search results

BLAST vs Swiss-Prot:
sp|P93004|PIP27_ARATH, E-value = 3e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30404916Cucumis meloBeta vulgaris15.8921.9884.2789forward
CNT30712585Cucumis meloGlycine max11.0726.587.162forward
CNT3085023Cucumis meloVigna radiata26.7930.9985.33150forward
CNT30145515Cucumis meloMedicago truncatula13.5731.0285.5376forward
CNT3079298Cucumis meloBrassica juncea15.3620.2488.3786forward
CNT30261241Cucumis meloBrassica rapa15.5423.983.9187forward
CNT30653715Cucumis meloRosa chinensis2524.0185140forward
CNT30214941Cucumis meloHelianthus annuus1532.9485.7184forward
CNT30478156Cucumis meloArabidopsis halleri11.0721.7587.162forward
CNT30354871Cucumis meloLactuca sativa13.3922.948875forward
CNT30120512Cucumis meloCitrus clementina11.6121.7489.2365forward

Expression of CNT3035626

Peptides detected in this lncRNA

>peptide 1 (86 aa)
MKALTNPTPTMAPAHCATMYPNALISDSEDSNAITHFGLFVVADDGGDCDVEKEESGDELSDKGSVEGPEGEFGDVDEWSRGWVDVV

Sequence

>CNT3035626
CGTAACCGAGCGATAACTAACACTTACTTGTACATTTGAGGTTAGAGGTTCAAAATATACGGACAAAAAATAAGCTTGGAAGTTGAAAGAAGAAGAAACT
CATGGCGATTTAAGAAGGGGAGAAGAAGAAACTTACAGGAATGTGAGAATCACGCGCGCTCCTCTTGGGATCAGTAGCGGAGAAGACAGTGTAAACAAGA
ACGAAAGTTCCAATAATCTCAGCACCAAGAGCTGTTCCTCTACTGTAACCAGAATTAACGGCGTTGGCTCCGCCGCCGTTGTTGTTATAATCATGCTTCA
TGAAAGCCTTGACTAACCCAACGCCAACAATGGCTCCGGCGCACTGCGCCACCATGTACCCAAACGCTCTGATCAGCGATTCCGAGGATTCCAACGCCAT
CACACATTTTGGTCTGTTTGTTGTTGCCGATGACGGTGGCGATTGTGACGTAGAGAAAGAGGAGAGTGGCGATGAACTCAGCGATAAGGGCTCTGTAGAA
GGACCAGAGGGTGAGTTCGGCGACGTCGATGAGTGGAGCCGGGGGTGGGTCGACGTAGTC