Detailed information on CNT30356208


BLAST search results

BLAST vs Swiss-Prot:
sp|P14009|14KD_DAUCA, E-value = 2e-20

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30206506Lactuca sativaHelianthus annuus39.3125.5686.4125forward

Expression of CNT30356208

Peptides detected in this lncRNA

>peptide 1 (30 aa)
AVQRQTAASRSTRSPRRLQHGVVAGVPTTR*

>peptide 2 (35 aa)
MVMRRKVVVTNPFEAILKCFEDVKEKLAQEMVVFFG

>peptide 3 (34 aa)
RCRGKLQPQDRQGPQGGCNMEWLLVYQLLGEPSH*

Sequence

>CNT30356208
GCGGTGCAGAGGCAAACTGCAGCCTCAAGATCGACAAGGTCCCCAAGGAGGCTGCAACATGGAGTGGTTGCTGGTGTACCAACTACTAGGTGAACCAAGT
CATTGAGCACGTTTGCACACACACCTAGCTTGAGTGTGTCTTTAGGACATGGGCCTTTGGTGGTGGTGGGCAAGAGGTTGAAGTTACAAGAGTAAAGAAG
AGAAGGTTGATGGTGATGAGGAGGAAAGTAGTTGTTACGAATCCCTTTGAAGCCATTTTGAAATGCTTTGAGGATGTGAAGGAAAAACTAGCTCAAGAAA
TGGTGGTTTTTTTTGGGG