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Detailed information on CNT30356177


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30567603Lactuca sativaActinidia chinensis63.5657.797.77764forward

Expression of CNT30356177

Peptides detected in this lncRNA

>peptide 1 (48 aa)
APHSARLETRTKESDMCASQRVSKPARRKEADWRDPPSGVHRRPTLIF*

>peptide 2 (40 aa)
MNRKPGYGAKLRANLEPTKGVGRLRQQDGGHGSRNPLRSV*

>peptide 3 (35 aa)
MKYNSHQAAGRILCRRLKYATGYCKWQSGLAATIH*

>peptide 4 (28 aa)
MKYNSHQVAGRILCRRLKYATGYCKWQSG

Sequence

>CNT30356177
GGCACCCCATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGAGTAAACCCGCAAGGCGTAAGGAAGCTGATTGG
CGGGATCCCCCTAGCGGGGTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTAT
GCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAA
TCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCCCGGGTGCGAGTTCTATCGGGTAAAGCGAATGATTAGAGGCATCGG
GGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGTGCGGCTGCTTTGTTGAGCCGTACCACGGAATCGAGAGCTCCAAGTGGGCCA
TTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCAAACTACGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATT
AAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTTAAG
CGCGTGACCTACACCCGGCCGTCGGGGCAAGTGCCAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTTGGGCGTGAGCCTGGGCGGAGC
GGCCGTCGGTGCGGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGG
CAGTAGGGGCCTCGGCCCCCAAAGGCACGTGTCGTTGGCTAAGCCTGTGCGACGGATGAGTCGTGCAGGCCGCCATGAAGTATAATTCCCATCAAGCGGC
GGGTAGAATCCTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTGCGTCGC
TCAGATTCGCCGCCATGAAGTATAATTCCCATCAAGTGGCGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGTGGCAGAGTGG
CC