Detailed information on CNT30356068


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000209, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30567604Lactuca sativaActinidia chinensis34.029494.95971forward
CNT30653443Lactuca sativaRosa chinensis45.0997.890.61287forward
CNT30433872Lactuca sativaPapaver somniferum42.8249.8892.061222forward

Expression of CNT30356068

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MKYNSHQVAGRILCRRLKYATGYCKWQSGLAATIH*

>peptide 2 (34 aa)
MNGLMRFPLSLSTIKRNHSEGNGLGRISGERRCC*

>peptide 3 (45 aa)
MVPVDANAIRFLPSALNVRVKKFNQARVNNRSNYDSLKVAKCLVI*

>peptide 4 (40 aa)
MNRKPGYGAKLRANLEPTKGVGRLRQQDGGHGSRNPLRSV*

>peptide 5 (31 aa)
MRRVCPLPVCRPTVGASAPKGTCRWLSLCDG*

>peptide 6 (34 aa)
MPIFLDPRPASAGRSGRRTLSGGEFGWGGTCFKR*

>peptide 7 (33 aa)
MCASQRVSKPARRKEADWRDPPSGVHRRPTLIF*

Sequence

>CNT30356068
ATTCCCTTAGTAACGGCAAGCGAACCGGGATCAGCCCAGCTTGAAAATTGGGCCACCTCGCTATCCGAAATGTAGTCTGGAGAAGCGTCCTCAGCGGCGG
AACGGGCCCAAGTCCCCTGGAAGGGGGCGCCAGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCTGCGAGTCGGGTTG
TTTGGGAATGCAGCCCCAATAGGGCGTCTGACATGTGTGCGAGTCAACGGGTGAGTAAACCCGCAAGGCGTAAGGAAGCTGATTGGCGGGATCCCCCTAG
CGGGGTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCG
AAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGT
AGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCCCGGGTGCGAGTTCTATCGGGTAAAGCGAATGATTAGAGGCATCGGGGGCGCAACGCCCT
CGACCTATTCTCAAACTTTAAATAGGTAGGACGGTGCGGCTGCTTTGTTGAGCCGTACCACGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAG
AACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCAAACTACGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACG
GTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTTAAGCGCGTGACCTACAC
CCGGCCGTCGGGGCAAGTGCCAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTTGGGCGTGAGCCTGGGCGGAGCGGCCGTCGGTGCGG
ATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTA
AGAGACGGGGGAAGCCCGTTAGATAGCGCGTTTCATGTGAGCTTCGAAAGGGAATCGAGTTTAAATTCCGGAACCGGGACGTGGCGGCTGACGACAACGT
TAGGGAGTCCGGAGACGCCGAAGAGGGGAAAGTCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGCGGTGTCCGGTGCGCCCCCGGCGGC
CCTTGAAAATCCGGAGGACCGAGTGCCTCCCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGCTGAACAACCTTTGGTCGATGGAACAATGTA
GGCAAGGGAAGTCAGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCAGCGGGTCGCTG
CGTGCCAGCCGGGGGACGGACTGGGAACGGCTCCTTCGGGGGGCTTCCCCGGGCGTCGAACAGCTAACTTAGAACTAGTACGAAAAAGGGGAATCTGTCT
GTTTAATTAAAACAAATCATTTCGATGGTCCCTGTGGATGCTAACGCAATTCGATTTCTGCCCAGTGCTCTGAATGTTAGAGTGAAGAAATTCAACCAAG
CACGGGTAAACAACAGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAATGAGATTCCCACT
GTCCCTGTCTACTATCAAGCGAAACCACAGTGAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGATGCTGTTGAGCTTGACTCTAGTCCGACTTT
GTGAAATGACTTGAGAGGTGTAGTATAAGTAGGAGCCTTCGGGCGAAAGTGAAATACCACTACTTTTAACGTTATTTTAGTTATTCCGTGAATTGGAAGC
GGGGCAATGCCCATCTTTTTGGACCCAAGGCCTGCTTCGGCGGGCCGATCCGGGCGGAGGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATGTT
TTAAAAGATAACGCAGGTGTACTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGTAATAGAAGGGTAAAATCTCGTTTGATTCTGATTTCCGGTACG
AATACGAACTGTGAAAGCGTGGCCTAACGATCCTTTAGACCTTTGGAATTTGAAACTAGAGGTGTCAGAAAATTTACCACAGGGATAACTGGCTTGTGGC
AGCCAAGCGTTCATAGCGACGTTGGTTTTTTATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAATAGAATTCACCAAGTGTTGGATTGTTCACCCATC
AGTAGGAACGTGAGCTGGGTTTAGACCGTCGTGAGATAGATTAGTTTTACCATACTGATGGCAGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAAC
CATTGATTCTCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGGATTACGACTGAACGCATCTAAGTCAGAATCCG
GGCTAGATGCGACGTGTGTGCCCGCTGCCTGTTTGCCGACCAACAGTAGGGGCCTCGGCCCCTAAAGGCACGTGTCGTTGGCTAAGCCTGTGCGACGGAT
GAGTTGTGTAGGCCGCCATGAAGTATAATTCCCATCAAGTGGCGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGTGGCAGAG
TGGCCTTGCTGCCACGATCCACTAAGATTCAACCCTGTGTCGCTCAGATTCGTC