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Detailed information on CNT30355893


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONGMAT000502, E-value = 2e-98

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30169882Lactuca sativaPistacia vera68.8855.3683.271142forward
CNT30568725Lactuca sativaActinidia chinensis67.9797.1681.91127forward
CNT30608559Lactuca sativaGossypium raimondii68.8274.7781.771141forward
CNT30410857Lactuca sativaPapaver somniferum55.0169.8381.47912forward

Expression of CNT30355893

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSKVIVFPVRVLTKICIPPRRRRTR*

>peptide 2 (60 aa)
MERRFLLYIVIGESTAVFELFTGEDKTLLIWRDSFLVLYLRFHIVDRIGTLDFKSNRLTG*

Sequence

>CNT30355893
AATACTAATCCAGAAATTTTCCCTAATTACCTATCCGAAAATAGTCAAAGAAAAGATTTTAGTTTTCGATAATCTAAAATTATAACACGATAATATCATC
TATTTCAAACACCAAACACATCAAGCAACGAAAACGAAAACAGGGTAAAATCGTTCCAACACAAATTCATACTTTTATTATATTATAGTATCCCACTAAA
ATCAGTCAACACCCATAATCAAATGAACACCAACAGAGCTATCTAGTTCAACTTACGGAGATCACCACCACGAAGACGAAGAACAAGGTGCAAAGTGGAC
TCCTTCTGGATGTTATAATCAGCCAAAGTTCGCCCATCTTCCAATTGCTTCCCGGCGAAGATCAATCGCTGTTGATCCGGTGGAATCCCCTCCTTATCCT
GGATTTTAGCCTTCACGTTATCGATAGTATCAGAGCTTTCCACCTCCAGAGTTATAGTTTTACCCGTTAAAGTCTTCACAAAGATCTGCATACCACCGCG
CAGACGAAGAACCAGGTGGAGAGTCGACTCCTTCTGGATGTTATAGTCTGCAAGTGTTCGCCCATCCTCCAGTTGTTTTCCGGCGAAGATCAATCGCTGT
TGATCCGGTGGAATCCCCTCCTTATCTTGAATTTTGGTTTTAACGTTATCGATGGTGTCGGAGCTCTCAACCTCCAAGGTGATTGTCTTTCCGGTGAGGG
TTTTAACGAAGATCTGCATACCTCCACGAAGACGAAGGACGAGATGAAGCGTTGACTCCTTTTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCAAG
CTGTTTACCGGCGAAGATGAGACGTTGCTGATCGGGAGGGATTCCTTCCTTGTCTTGAATCTTTGTCTTCACGTTGTCGATTGTGTCCGAGCTCTCCACC
TCCAACGTGATCGTCTTCCCGGTGAGGGTTTTAACGAAGATCTGCATACCTCCACGAAGACGGAGGACGAGATGAAGCGTTGACTCCTTTTGGATGTTGT
AGTCGGCGAGGGTACGGCCGTCCTCAAGCTGTTTACCGGCGAAGATGAGACGCTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGAATCTTCGTCTTCAC
GTTGTCGATTGTATCAGAGCTCTCGACCTCCAACGTGATCGTCTTTCCGGTTAGGGTTTTGACGAAGATCTGCATGCCTCCACGAAGACGAAGAACAAGA
TGGAGCGTCGATTCCTTCTGTATATTGTAATCGGCGAGAGTACGGCCGTCTTCGAGCTGTTTACCGGCGAAGATAAGACGTTGTTGATCTGGAGGGATTC
CTTCCTTGTCCTGTATCTTCGTTTTCACATTGTCGATCGTATCGGAACTCTCGACTTCAAGAGTAATCGTCTTACCGGTTAGGGTTTTCACAAAGATCTG
CATCTATATTCAGAATAACAACGAATCAAAACTTCGAACCAATATAATTCGCATAATCGACTAGGATTCTTGAATATAAACTGGAAATTTTACTTCTATA
AAGAAATCATGATTTACCTTCTGATCAAAAAAGATTGAATGCAACGATGAACTTGAGAAATTGTTATTTGCTTGGGATTTGGATGATATTGTGAATTTTG
GGGACCAAGAAAATCTCTATTTATAACCGCCTTTGAGGAAGGTTTCTTTGTTCTCGAG