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Detailed information on CNT30355742


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONGMAT000502, E-value = 3e-90

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379315Lactuca sativaManihot esculenta42.252.2683.48660forward
CNT30408298Lactuca sativaPapaver somniferum73.2180.0780.091145forward
CNT30120444Lactuca sativaCitrus clementina72.6371.2280.91136forward

Expression of CNT30355742

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSKVIVFPVRVLTKICIPPRRRRTR*

>peptide 2 (60 aa)
MERRFLLYIVIGESTAVFELFTGEDKTLLIWRDSFLVLYLRFHIVDRIGTLDFKSNRLTG*

Sequence

>CNT30355742
AATACTAATCCAGAAATTTTCCCTAATTACCTATCCGAAAATAGTCAAAGAAAAGATTTTAGTTTTCGATAATCTAAAATTATAACACGATAATATCATC
TATTTCAAACACCAAACACATCAAGCAACGAAAACGAAAACAGGGTAAAATCGTTCCAACACAAATTCATACTTTTATTATATTATAGTATCCCACTAAA
ATCAGTCAACACCCATAATCAAATGAACACCAACAGAGCTATCTAGTTCAACTTACGGAGATCACCACCACGAAGACGAAGAACAAGGTGCAAAGTGGAC
TCCTTCTGGATGTTATAATCAGCCAAAGTTCGCCCATCTTCCAATTGCTTCCCGGCGAAGATCAATCGCTGTTGATCCGGTGGAATCCCCTCCTTATCCT
GGATTTTAGCCTTCACGTTATCGATAGTATCAGAGCTTTCCACCTCCAGAGTTATAGTTTTACCCGTTAAAGTCTTCACAAAGATCTGCATACCACCGCG
CAGACGAAGAACCAGGTGCAAAGTGGACTCCTTCTGGATGTTATAATCAGCTAACGTACGACCATCTTCCAATTGCTTCCCTGCAAAGATCAACCTCTGT
TGATCAGGTGGGATCCCCTCCTTATCCTGGATTTTAGCCTTCACGTTATCGATAGTATCAGAGCTTTCCACCTCCAGCGTTATAGTTTTACCCGTTAAAG
TCTTCACGAAGATCTGCATACCACCGCGCAGACGAAGAACCAGGTGGAGAGTCGACTCCTTCTGGATGTTATAGTCTGCAAGTGTTCGCCCATCCTCCAG
TTGTTTTCCGGCGAAGATCAATCGCTGTTGATCCGGTGGAATCCCCTCCTTATCTTGAATTTTGGTTTTAACGTTATCGATGGTGTCGGAGCTCTCAACC
TCCAAGGTGATCGTCTTCCCGGTGAGGGTTTTAACGAAGATCTGCATACCTCCACGAAGACGGAGGACGAGATGAAGCGTTGACTCCTTTTGGATGTTGT
AGTCGGCGAGGGTACGGCCGTCCTCAAGCTGTTTACCGGCGAAGATGAGACGCTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGAATCTTCGTCTTCAC
GTTGTCGATTGTATCAGAGCTCTCGACCTCCAACGTGATCGTCTTTCCGGTTAGGGTTTTGACGAAGATCTGCATGCCTCCACGAAGACGAAGAACAAGA
TGGAGCGTCGATTCCTTCTGTATATTGTAATCGGCGAGAGTACGGCCGTCTTCGAGCTGTTTACCGGCGAAGATAAGACGTTGTTGATCTGGAGGGATTC
CTTCCTTGTCCTGTATCTTCGTTTTCACATTGTCGATCGTATCGGAACTCTCGACTTCAAGAGTAATCGTCTTACCGGTTAGGGTTTTCACAAAGATCTG
CATCTATATTCAGAATAACAACGAATCAAAACTTCGAACCAATATAATTCGCATAATCGACTAGGATTCTTGAATATAAACTGGAAATTTTACTTCTATA
AAGAAATCATGATTTACCTTCTGATCAAAAAAGATTGAATGCAACGATGAACTTGAGAAATTGT