Detailed information on CNT30355692


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT008675, E-value = 4e-53

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3052962Lactuca sativaAmborella trichopoda35.9120.5483.23167forward

Expression of CNT30355692

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MGFCLGCIRPSSSMKTLPSRFPRTYPWSI*

>peptide 2 (44 aa)
MLSPSNPEIGTNGILSGLYPTFFKYEDTSFTISSYLPLEYLGVVA

Sequence

>CNT30355692
CAGGAGATGATAAAATGTTGAAAATAGATTTAAATGTTTTTAAAAACCAACTCATGCCATAGACCACTATAGATTTAAACCACAACAAAAGTCTTCAAAC
CTGGGAAAGTTTCCAACATAACGAAACTTCCCAGATCCAATACCAAAAACTCTTCAACAAAATATAAGATTGTCCAAAACTAGTAATCCAAACAGACAGA
AAATAAAAAGACTCGATCACCAAAACACAACACCTATCATATCACTTGACACCCTTCTTGGCTGCGGCCTTGGTCACCTTAGCTCCAGGTTGGTCCCTTG
TACCAGTCAAGGTTGGTTGACCTCTCAATCATGTTGTCACCTTCGAATCCAGAGATTGGAACGAATGGGATTTTGTCTGGGTTGTATCCGACCTTCTTCA
AGTATGAAGACACTTCCTTCACGATTTCCTCGTACCTACCCTTGGAGTATTTAGGGGTGGTAGCA