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Detailed information on CNT30355575


BLAST search results

BLAST vs Swiss-Prot:
sp|P27492|CB21_TOBAC, E-value = 2e-126

BLAST vs NONCODE:
NONBNAT007398, E-value = 2e-61

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30404250Lactuca sativaBeta vulgaris82.9751.7580.79531forward

Expression of CNT30355575

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHLQWMTSSSRFFENVSGSAESPAVSQP*

Sequence

>CNT30355575
TGCCCACTAAAACCATATATTAATTAATTAATTTACATAAAAATTTCATTACATTCACTTTCCGGGTACAAAGTTTGTGGCATAAGACCAAGCATTGTTG
GCAACGGGATCAGCAAGCCCTAACGGGTCAAAGCTACCACCAGGGTAAAGCGGGTCAACAACCTCACCCAAGGGTCCACCTGCAATTCTGTAACCTTCAA
CCGCACCCATCAAGATCACTTGGGTTGCCCAGATGGCTAGAATACTCTGAGCATGGATCAAACTAGGGTTTCCCAAGTAATCAAGCCCACCTTCACTGAA
GATCTGTGATCCTGCCTTGAACCAAACAGCCTCACCGAATTTCACACCATTACGAGCCAAGAGCTCTGGGAAGACGCACCCAAGAGCTCCGAGCATGGCC
CACCTGCAGTGGATGACTTCAAGCTCACGGTTTTTTGAGAATGTTTCTGGGTCAGCTGAAAGTCCGGCGGTATCCCAGCCATAGTCACCGGGGAATTCAC
CGGTGAGATATGATGGGGCTTCACCGGAGAACGGGCCTAGGTACTTGACTCGGTCGGGTCCGTACCATGGACTTCCTGATGGTGCAACCTTCTTTGCAGA
TGTGGTTTTCCTCATTGAAACCCGCCCGTTTCCTAAAAGC