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Detailed information on CNT30355284


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697185Lactuca sativaOryza sativa16.7930.4982.2118forward
CNT30708793Lactuca sativaGlycine max10.122.4787.3271forward

Expression of CNT30355284

Peptides detected in this lncRNA

>peptide 1 (38 aa)
LSVLIPGTMPCSTRTSTIFLPSTVDWYKVSSKRMAPEM*

Sequence

>CNT30355284
CCTTGTCGGTTTTGATACCGGGGACGATGCCTTGTTCCACTAGGACATCGACGATCTTCTTACCGTCGACTGTGGATTGGTACAAAGTTTCCTCGAAGAG
GATGGCACCGGAGATGTAGTTGCCTAGACCGGGTGCGCTAACCAGGAGGGTTCGGTAAGCCTGGCTAACCGTTTTCCACAAGTAGCGTTGGACTCATCCA
TGGCCAGGATTCCTCGGCCAGGGGTGGCAATAGTTTTCTACATTACCACATAAACTCATCAGAAAAAAACTAATTATCTACAACTTAAAACCATAAGAAT
ATTATAACAGACATCTAAACATCTCTAAAGCTTTTAAAAATTCTCATCACGGGTCAATAATGGTCCCAAATTGACTCATAGTCGATTTGATTCTCATTCG
ATAACGACTGACTTTTTTTTTACTGATTTATATCCAATCCAAAGTTCAAAAATCAGTTGTATAAACATAAGAAAGAAACAGCAAAAACACGAACCGCTGT
TTTGACGAGTTCATCGGCGTAACTGGCACGAACAGCGAGTGCAGAGGGTGCAGTCGAGTTGAAACGGACCACAGAAAGGGGTGACTGGCGAAGGGTCTGA
CCCTTGACCCATTCGGACTTATCAAGGATGGTTGCTGGAGATGTCTTGAAGAGAGATGCTGAGGCCATGGTTGGTTTCTGTGAGCTCAACTTCTATCCTT
TTG