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Detailed information on CNT30355133


BLAST search results

BLAST vs Swiss-Prot:
sp|Q96553|METK3_CATRO, E-value = 7e-126

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641111Lactuca sativaNymphaea colorata27.224.3681.93238forward
CNT30698521Lactuca sativaQuercus lobata18.0628.1685.44158forward
CNT30374815Lactuca sativaArabidopsis thaliana22.6347.9481.31198forward
CNT30628391Lactuca sativaVigna unguiculata23.217.783.74203forward
CNT30712013Lactuca sativaGlycine max18.0635.3583.54158forward
CNT30158121Lactuca sativaPistacia vera21.4930.0881.91188forward
CNT30181754Lactuca sativaSecale cereale18.8626.2381.82165forward
CNT30561874Lactuca sativaActinidia chinensis23.6623.4784.54207forward
CNT30508429Lactuca sativaSolanum lycopersicum6.0621.4688.6853forward
CNT30144140Lactuca sativaMedicago truncatula22.5152.8283.25197forward
CNT30667060Lactuca sativaTriticum dicoccoides20.828.6680.77182forward
CNT3082721Lactuca sativaBrassica juncea17.0351.5682.55149forward
CNT30606743Lactuca sativaGossypium raimondii20.817.0483.52182forward
CNT30650282Lactuca sativaRosa chinensis22.1716.4781.44194forward
CNT30212612Lactuca sativaHelianthus annuus20.6975.182.32181forward
CNT30686961Lactuca sativaTriticum urartu22.1722.3880.93194forward
CNT30349160Lactuca sativaEragrostis tef20.1118.9985.23176forward
CNT30331991Lactuca sativaDioscorea rotundata16.1129.8182.27141forward
CNT30101810Lactuca sativaOryza rufipogon22.177.6579.9194forward
CNT30174424Lactuca sativaVigna angularis22.5124.2380.2197forward
CNT30113343Lactuca sativaFicus carica10.9727.1286.4696forward

Expression of CNT30355133

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MGEWHELRGFICSVPKHVSLITSTDFFWFLAEVAMDALSYVGALLLDVD*

>peptide 2 (41 aa)
MVFSSSFVMLGGYKHCMNPNWNHGAIIVFIFNCYLCFSIGA*

>peptide 3 (53 aa)
MSGLCCSMLTRTLQLSASSPTSGDVNPISLQVSQATLLSGSCSRHASRMASET*

>peptide 4 (55 aa)
QSHKKPEQYTAVQVPKPPHSWPLASQYKPHSGQPSSDPSRRKHHHRGLPTHRKYQ*

>peptide 5 (60 aa)
MAPLSFLYSTVTCVFPSGRSHEQVLFFLTSVNLAPSLVARTWVSGMSSGVSSVAYPNMCP*

>peptide 6 (94 aa)
NRIRNLNNTPPCKSRSHHTLGRLPHNISPTPVNLRRILPGESTTTVGSPPTVSINDNFPASEPRITVGTTNHKPPRRVQMKDGFFVKFRHVGWI*

Sequence

>CNT30355133
CAATCGCATAAGAAACCTGAACAATACACCGCCGTGCAAGTCCCGAAGCCACCACACTCTTGGCCGCTTGCCTCACAATATAAGCCCCACTCCGGTCAAC
CTTCGTCGGATCCTTCCCGGAGAAAGCACCACCACCGTGGGCTCCCCACCCACCGTAAGTATCAATGATAATTTTCCGGCCAGTGAGCCCCGCATCACCG
TGGGGACCACCAATCACAAACCGCCCAGACGGGTTCAGATGAAAGATGGTTTTTTCGTCAAGTTTCGTCATGTTGGGTGGATATAAGCACTGTATGAACC
CTAATTGGAACCATGGCGCCATTATCGTTTTTATATTCAACTGTTACCTGTGTTTTTCCATCGGGGCGTAGCCATGAACAGGTTTTGTTCTTTCTGACTT
CGGTTAATTTAGCTCCTAGTTTGGTTGCGAGGACATGGGTGAGTGGCATGAGCTCAGGGGTTTCATCTGTAGCGTACCCAAACATGTGTCCTTGATCACC
AGCACCGATTTCTTCTGGTTTCTTGCTGAGGTGGCCATGGACGCCTTGAGCTATGTCGGGGCTTTGTTGCTCGATGTTGACTAGGACTTTGCAGTTGTCA
GCATCGAGTCCGACTTCGGGAGATGTGAATCCGATTTCTTTGCAGGTTTCACAGGCGACTTTGCTTTCGGGGTCTTGTTCTAGACATGCGTCTAGAATGG
CGTCTGAGACTTGATCACATAGCTTGTCTGGGTGGCCTTCGTTCACGGATTCTGATGTGAATAGGAAGGTTTCCATCTCTGTGATAATAAGAGTTCAATT
AGCAACGAATGAAATCCAGGCAATTTCTTCATATGAATTTTGAACGAGTGTATCACATTAGGATCATTACTGAAG