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Detailed information on CNT30354733


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315800Lactuca sativaCorylus avellana22.0542.1781.96194forward
CNT30379091Lactuca sativaManihot esculenta26.1438.9880230forward
CNT30708121Lactuca sativaGlycine max5572.8978.72484forward
CNT30648253Lactuca sativaRosa chinensis19.6625.9485.55173forward

Expression of CNT30354733

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MMGCTRGTTGYSPVMKLAKNPSHQHKAKTVHR*

Sequence

>CNT30354733
ATTGGTACCTGTAGTTGGGGGATGTAGGGCTGTATGGACTACTAGGAGAATAAGCCAACGAGGGGCTGTACTTAGCGGATGAAGGGTTGTAACTTGGTGA
GGTGGGACTGTAACTTGGAGAAGTAGGACTGTAGCTTGGGGAAGTAGGACTGTACCCAGGTGAAGTTGGGCTGTAAGCAGGGGAGGTTGGGCTGTAGGAA
GGGGAGGTCGGGCTGTAGGATGGTGATGTTGGGCTGTAGGAAGGAGAGGTCGGGCTGTAAGCCGGAGAGGTCGGGCTGTAAGCTGGCGATGTAGGGCTGT
AGCTAGGTGATGTGGGTGAGTAGCTTGGTGAGGTAGGGGAGTAGCTAGGTGAAGTGGGTGAGTAGGTAGGACTTGTTGGGCTATAACCGGGTGAACTTGG
GCTGTAAGTTGGAGAGGTGGGACTGTAACCCGGAGATGTAGGGCTATAGCCCGGTGAGGTTGGGCTATAACCAGGCGAGGTGGGGCTGTATCCCGGAGAT
GATGGGCTGTACCCGGGGGACGACGGGCTATAGCCCGGTGATGAAGTTGGCGAAAAACCCATCCCACCAACATAAGGCGAAAACTGTGCATCGTTAATCG
GAGACAGCCGTAGATTTGGGCTCAACAGATAATTCGTGGGAGACATTGCACCATCGTGGAAAGGAGTAATGGGGGACCGCCCAGGTGTCATCCCGATATC
CAGCCCGTCCATGTAACTCGGAAGCTGAACATCAATCGCTTGCTGTAACATCTCTTCGTTCAACAACAAAGCACAGTCTCCGGTCCCAATAGGAGCAAGC
TGCCCCAGCATTATGTTCTCAGTAACACCCCGGAGATAATCGGTTTCCGCATAAACCGCAGCATCAAGAAGAATATCAAC