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Detailed information on CNT30354697


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT001646, E-value = 2e-93

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678637Lactuca sativaSetaria viridis29.4651.2396.15208reverse complement
CNT30549212Lactuca sativaIpomoea triloba49.2911.5399.71348forward
CNT30513456Lactuca sativaJuglans regia10022.2498.58706forward
CNT30272552Lactuca sativaChenopodium quinoa49.2927.6697.99348forward
CNT30730494Lactuca sativaCorchorus capsularis49.2939.55100348forward
CNT30196906Lactuca sativaPisum sativum31.329.1998.64221forward
CNT30494210Lactuca sativaOlea europaea28.478.2382.09201reverse complement
CNT30220355Lactuca sativaHordeum vulgare23.2354.8595.73164forward
CNT30396824Lactuca sativaTriticum turgidum49.2934.5697.13348reverse complement
CNT30569398Lactuca sativaActinidia chinensis38.5313.9298.9272forward
CNT30552690Lactuca sativaOryza glaberrima49.2922.7396.55348forward
CNT30442196Lactuca sativaAegilops tauschii49.2941.0497.13348reverse complement
CNT30258490Lactuca sativaAvena sativa23.3722.8583.64165forward
CNT30657980Lactuca sativaTriticum dicoccoides33.2957.695.74235reverse complement
CNT30205642Lactuca sativaHelianthus annuus49.2933.62100348forward
CNT30688674Lactuca sativaTriticum urartu49.2926.4297.41348forward
CNT30347837Lactuca sativaEragrostis tef35.5532.5696.81251reverse complement
CNT30620564Lactuca sativaCajanus cajan49.296.72100348reverse complement
CNT30481523Lactuca sativaChara braunii9.2127.0895.3865reverse complement
CNT30410880Lactuca sativaPapaver somniferum65.1650.7796.74460forward
CNT30642274Lactuca sativaCannabis sativa49.2942.5995.11348reverse complement
CNT3036965Lactuca sativaCucumis melo45.6144.2399.69322forward
CNT30149641Lactuca sativaBrachypodium distachyon79.4627.8395.54561forward
CNT30104374Lactuca sativaOryza rufipogon49.2926.295.98348reverse complement
CNT30576813Lactuca sativaOryza barthii20.8219.9597.96147forward
CNT30604015Lactuca sativaOryza punctata40.7959.6397.22288reverse complement
CNT30551087Lactuca sativaOryza brachyantha10.3424.595.8973reverse complement

Expression of CNT30354697

Peptides detected in this lncRNA

>peptide 1 (29 aa)
GSDIPCRESSDPHERRNDLGTVSERDSVK*

>peptide 2 (56 aa)
MSVKMRTTCTWTERPYEASLFPGIGFGLFLRSLGGRRRRPPSGGVRAISEIPLWKS*

>peptide 3 (44 aa)
MFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTRGP

Sequence

>CNT30354697
AAGGTAGCGACATTCCTTGTCGGGAAAGTTCCGACCCGCATGAAAGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGACTCGGTGAAATAGACATGTCT
GTGAAGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTCACTGTTCCCTGGGATTGGCTTTGGGCTTTTCCTGCGCAGCTTAGGTGGAA
GGCGAAGAAGGCCTCCTTCCGGGGGGGTCCGAGCCATCAGTGAGATACCACTCTGGAAGAGCTAGAATTCTAACCTTGTGTCAGGACGTACGGGCCAAGG
GACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTC
GAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGCTGATCTTC
CCCAAGAGCTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTCGCCACCTGGGGCTGTAGTATGTTCCAAGGGTTGGGCTGTTCGCCCATTA
AAGCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTCGGTCCATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTACGAGAGG
ACCGGG